Cucsa.114230 (Cucumis sativus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Cucsa.114230 T20707_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.114230.1 KH 256 314
Cucsa.114230.2 KH 256 307

Links

Other KH family RBPs
Other Cucumis sativus RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.767
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.717
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.833
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.754
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.787
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.807
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.807
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.815
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.750
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.750
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.750
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.729
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.705
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.712
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.767
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.721
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.778
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.852
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.833
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.754
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.864
mgf006761m Mimulus guttatus mgf006761m N 0.705
PDK_20s1419021g001 Phoenix dactylifera PDK_20s1419021g001 N 0.709
SB03G042090 Sorghum bicolor Sb03g042090 N 0.831