estExt_Genewise1Plus.C_10494 (Cochliobolus heterostrophus C5)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		estExt_Genewise1Plus.C_10494 T25358_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_10494 RRM 451 512
estExt_Genewise1Plus.C_10494 PUF 656 690
estExt_Genewise1Plus.C_10494 PUF 692 727
estExt_Genewise1Plus.C_10494 PUF 736 761
estExt_Genewise1Plus.C_10494 PUF 763 798
estExt_Genewise1Plus.C_10494 PUF 802 835

Links

Other PUF,RRM family RBPs
Other Cochliobolus heterostrophus C5 RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03872 Arthroderma benhamiae ARB_03872 N 0.772
BDBG_08030 Blastomyces dermatitidis BDBG_08030 N 0.776
ACLA_089090 Aspergillus clavatus CADACLAG00008911 N 0.784
AFLA_129760 Aspergillus flavus CADAFLAG00010034 N 0.769
AFUA_2G05610 Aspergillus fumigatus CADAFUAG00003379 N 0.764
An02g13940 Aspergillus niger CADANGAG00002920 N 0.785
ANIA_07474 Aspergillus nidulans CADANIAG00000567 N 0.743
AO090001000672 Aspergillus oryzae CADAORAG00000614 N 0.769
ATEG_06748 Aspergillus terreus CADATEAG00008207 N 0.759
NFIA_082330 Neosartorya fischeri CADNFIAG00006734 N 0.776
CHGG_03262 Chaetomium globosum CHGG_03262 N 0.716
CIMG_00764 Coccidioides immitis CIMG_00764 N 0.776
CPSG_07974 Coccidioides posadasii CPSG_07974 N 0.772
EAT78761.1 Phaeosphaeria nodorum EAT78761.1 N 0.898
estExt_fgenesh1_pm.C_60200 Neurospora tetrasperma estExt_fgenesh1_pm.C_60200 N 0.720
estExt_fgenesh3_pm.C_50632 Neurospora discreta estExt_fgenesh3_pm.C_50632 N 0.720
estExt_Genewise1Plus.C_40921 Myceliophthora thermophila estExt_Genewise1Plus.C_40921 N 0.712
e_gw1.1.1743.1 Cryphonectria parasitica e_gw1.1.1743.1 N 0.702
e_gw1.3.863.1 Nectria haematococca e_gw1.3.863.1 N 0.725
fgenesh1_pm.00082_#_71 Aspergillus carbonarius fgenesh1_pm.00082_#_71 N 0.771
fgenesh1_pm.C_chr_3000287 Mycosphaerella graminicola fgenesh1_pm.C_chr_3000287 N 0.723
FGSG_13028 Fusarium graminearum FGSG_13028 N 0.720
FOXG_01859 Fusarium oxysporum FOXG_01859 N 0.712
FVEG_08236 Fusarium verticillioides FVEG_08236 N 0.716
GLRG_00145 Colletotrichum graminicola GLRG_00145 N 0.729
GSTUMT00008056001 Tuber melanosporum GSTUMT00008056001 N 0.742
gw1.1.1237.1 Trichoderma reesei gw1.1.1237.1 N 0.700
gw1.2.1414.1 Trichoderma virens gw1.2.1414.1 N 0.700
HCAG_00994 Histoplasma capsulatum HCAG_00994 N 0.764
MCYG_03539 Microsporum canis MCYG_03539 N 0.768
MGG_06318 Magnaporthe oryzae MGG_06318 N 0.730
MGYG_03148 Microsporum gypseum MGYG_03148 N 0.772
NCU06199 Neurospora crassa NCU06199 N 0.720
PABG_04750 Paracoccidioides brasiliensis PABG_04750 N 0.776
Pc22g08770 Penicillium chrysogenum Pc22g08770 N 0.768
PMAA_071510 Penicillium marneffei PMAA_071510 N 0.768
PTRG_10794 Pyrenophora tritici repentis PTRG_10794 N 0.974
SNOG_13737 Stagonospora nodorum SNOG_13737 N 0.898
TEQG_01260 Trichophyton equinum TEQG_01260 N 0.772
TERG_04970 Trichophyton rubrum TERG_04970 N 0.772
TESG_05413 Trichophyton tonsurans TESG_05413 N 0.772
TRV_06639 Trichophyton verrucosum TRV_06639 N 0.768
UREG_00739 Uncinocarpus reesii UREG_00739 N 0.759
VDAG_05840 Verticillium dahliae VDAG_05840 N 0.733
VDBG_06774 Verticillium albo atrum VDBG_06774 N 0.733