An02g13940 (Aspergillus niger)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		CADANGAG00002920 T25337_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00002847 RRM 482 543
CADANGAP00002847 PUF 680 714
CADANGAP00002847 PUF 717 751
CADANGAP00002847 PUF 753 786
CADANGAP00002847 PUF 788 823
CADANGAP00002847 PUF 827 860

Links

Other PUF,RRM family RBPs
Other Aspergillus niger RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.00082_#_71 Aspergillus carbonarius fgenesh1_pm.00082_#_71 N 0.970
NFIA_082330 Neosartorya fischeri CADNFIAG00006734 N 0.945
AFUA_2G05610 Aspergillus fumigatus CADAFUAG00003379 N 0.941
ACLA_089090 Aspergillus clavatus CADACLAG00008911 N 0.937
CIMG_00764 Coccidioides immitis CIMG_00764 N 0.928
ANIA_07474 Aspergillus nidulans CADANIAG00000567 N 0.928
CPSG_07974 Coccidioides posadasii CPSG_07974 N 0.924
Pc22g08770 Penicillium chrysogenum Pc22g08770 N 0.924
PMAA_071510 Penicillium marneffei PMAA_071510 N 0.916
ARB_03872 Arthroderma benhamiae ARB_03872 N 0.911
TEQG_01260 Trichophyton equinum TEQG_01260 N 0.911
UREG_00739 Uncinocarpus reesii UREG_00739 N 0.911
TERG_04970 Trichophyton rubrum TERG_04970 N 0.911
MGYG_03148 Microsporum gypseum MGYG_03148 N 0.911
BDBG_08030 Blastomyces dermatitidis BDBG_08030 N 0.911
AO090001000672 Aspergillus oryzae CADAORAG00000614 N 0.908
AFLA_129760 Aspergillus flavus CADAFLAG00010034 N 0.908
TESG_05413 Trichophyton tonsurans TESG_05413 N 0.907
TRV_06639 Trichophyton verrucosum TRV_06639 N 0.907
MCYG_03539 Microsporum canis MCYG_03539 N 0.907
HCAG_00994 Histoplasma capsulatum HCAG_00994 N 0.907
PABG_04750 Paracoccidioides brasiliensis PABG_04750 N 0.903
ATEG_06748 Aspergillus terreus CADATEAG00008207 N 0.899
GSTUMT00008056001 Tuber melanosporum GSTUMT00008056001 N 0.844
estExt_Genewise1Plus.C_40921 Myceliophthora thermophila estExt_Genewise1Plus.C_40921 N 0.818
MGG_06318 Magnaporthe oryzae MGG_06318 N 0.815
GLRG_00145 Colletotrichum graminicola GLRG_00145 N 0.810
e_gw1.3.863.1 Nectria haematococca e_gw1.3.863.1 N 0.806
estExt_fgenesh3_pm.C_50632 Neurospora discreta estExt_fgenesh3_pm.C_50632 N 0.802
NCU06199 Neurospora crassa NCU06199 N 0.797
estExt_fgenesh1_pm.C_60200 Neurospora tetrasperma estExt_fgenesh1_pm.C_60200 N 0.797
CHGG_03262 Chaetomium globosum CHGG_03262 N 0.797
FGSG_13028 Fusarium graminearum FGSG_13028 N 0.793
e_gw1.1.1743.1 Cryphonectria parasitica e_gw1.1.1743.1 N 0.792
VDBG_06774 Verticillium albo atrum VDBG_06774 N 0.789
FVEG_08236 Fusarium verticillioides FVEG_08236 N 0.789
VDAG_05840 Verticillium dahliae VDAG_05840 N 0.789
estExt_Genewise1Plus.C_10494 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_10494 N 0.785
FOXG_01859 Fusarium oxysporum FOXG_01859 N 0.785
gw1.1.1237.1 Trichoderma reesei gw1.1.1237.1 N 0.776
PTRG_10794 Pyrenophora tritici repentis PTRG_10794 N 0.776
SS1G_13666 Sclerotinia sclerotiorum SS1G_13666 N 0.768
SNOG_13737 Stagonospora nodorum SNOG_13737 N 0.761
EAT78761.1 Phaeosphaeria nodorum EAT78761.1 N 0.761
e_gw1.10.966.1 Trichoderma atroviride e_gw1.10.966.1 N 0.759
BC1G_15545 Botrytis cinerea BC1G_15545 N 0.759
fgenesh1_pm.C_chr_3000287 Mycosphaerella graminicola fgenesh1_pm.C_chr_3000287 N 0.756
estExt_Genewise1Plus.C_30707 Thielavia terrestris estExt_Genewise1Plus.C_30707 N 0.751
gw1.2.1414.1 Trichoderma virens gw1.2.1414.1 N 0.751
Pa_7_8390 Podospora anserina Pa_7_8390 N 0.730