CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPSG_07974
(
Coccidioides posadasii
)
PUF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
PF00076 (RRM_1)
IPR001313
IPR000504
CPSG_07974
T25302_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPSG_07974T0
RRM
458
519
LWIGSIPVSTTVTSLDAIFSMYGKIESTRVLTHKNCGFVNFERVESAIQAKSLLNGKEIFPG
CPSG_07974T0
PUF
661
695
TMLPEIAELSSDYLGNTVVQKLFEFCSEATKEEML
CPSG_07974T0
PUF
698
732
IAPHLAEIGVHKNGTWAAQKIIDVAKTHTQKQMIV
CPSG_07974T0
PUF
734
767
SLRPYTVPLFLDQYGNYVLQCCLRFGPPYNDFIF
CPSG_07974T0
PUF
769
804
TMLSRMWEIAQGRFGARAMRACLESHHATKDQQRML
CPSG_07974T0
PUF
808
841
IALHSVQLATNANGALLLTWFLDTCNFPHRRTVL
Links
Other
PUF,RRM
family RBPs
Other
Coccidioides posadasii
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIMG_00764
Coccidioides immitis
CIMG_00764
N
0.996
UREG_00739
Uncinocarpus reesii
UREG_00739
N
0.966
BDBG_08030
Blastomyces dermatitidis
BDBG_08030
N
0.941
HCAG_00994
Histoplasma capsulatum
HCAG_00994
N
0.932
TEQG_01260
Trichophyton equinum
TEQG_01260
N
0.932
TERG_04970
Trichophyton rubrum
TERG_04970
N
0.932
MGYG_03148
Microsporum gypseum
MGYG_03148
N
0.932
ARB_03872
Arthroderma benhamiae
ARB_03872
N
0.932
MCYG_03539
Microsporum canis
MCYG_03539
N
0.932
TRV_06639
Trichophyton verrucosum
TRV_06639
N
0.928
TESG_05413
Trichophyton tonsurans
TESG_05413
N
0.928
An02g13940
Aspergillus niger
CADANGAG00002920
N
0.924
PABG_04750
Paracoccidioides brasiliensis
PABG_04750
N
0.920
ACLA_089090
Aspergillus clavatus
CADACLAG00008911
N
0.920
PMAA_071510
Penicillium marneffei
PMAA_071510
N
0.920
fgenesh1_pm.00082_#_71
Aspergillus carbonarius
fgenesh1_pm.00082_#_71
N
0.911
ANIA_07474
Aspergillus nidulans
CADANIAG00000567
N
0.907
NFIA_082330
Neosartorya fischeri
CADNFIAG00006734
N
0.907
AFLA_129760
Aspergillus flavus
CADAFLAG00010034
N
0.899
AO090001000672
Aspergillus oryzae
CADAORAG00000614
N
0.899
ATEG_06748
Aspergillus terreus
CADATEAG00008207
N
0.895
AFUA_2G05610
Aspergillus fumigatus
CADAFUAG00003379
N
0.890
Pc22g08770
Penicillium chrysogenum
Pc22g08770
N
0.890
GSTUMT00008056001
Tuber melanosporum
GSTUMT00008056001
N
0.827
MGG_06318
Magnaporthe oryzae
MGG_06318
N
0.811
estExt_fgenesh1_pm.C_60200
Neurospora tetrasperma
estExt_fgenesh1_pm.C_60200
N
0.810
CHGG_03262
Chaetomium globosum
CHGG_03262
N
0.810
e_gw1.3.863.1
Nectria haematococca
e_gw1.3.863.1
N
0.810
estExt_Genewise1Plus.C_40921
Myceliophthora thermophila
estExt_Genewise1Plus.C_40921
N
0.810
NCU06199
Neurospora crassa
NCU06199
N
0.810
estExt_fgenesh3_pm.C_50632
Neurospora discreta
estExt_fgenesh3_pm.C_50632
N
0.806
GLRG_00145
Colletotrichum graminicola
GLRG_00145
N
0.802
FGSG_13028
Fusarium graminearum
FGSG_13028
N
0.797
FVEG_08236
Fusarium verticillioides
FVEG_08236
N
0.793
VDAG_05840
Verticillium dahliae
VDAG_05840
N
0.793
VDBG_06774
Verticillium albo atrum
VDBG_06774
N
0.793
FOXG_01859
Fusarium oxysporum
FOXG_01859
N
0.789
gw1.1.1237.1
Trichoderma reesei
gw1.1.1237.1
N
0.789
e_gw1.1.1743.1
Cryphonectria parasitica
e_gw1.1.1743.1
N
0.781
SS1G_13666
Sclerotinia sclerotiorum
SS1G_13666
N
0.776
estExt_Genewise1Plus.C_10494
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_10494
N
0.772
e_gw1.10.966.1
Trichoderma atroviride
e_gw1.10.966.1
N
0.772
SNOG_13737
Stagonospora nodorum
SNOG_13737
N
0.765
EAT78761.1
Phaeosphaeria nodorum
EAT78761.1
N
0.765
BC1G_15545
Botrytis cinerea
BC1G_15545
N
0.764
gw1.2.1414.1
Trichoderma virens
gw1.2.1414.1
N
0.764
PTRG_10794
Pyrenophora tritici repentis
PTRG_10794
N
0.764
fgenesh1_pm.C_chr_3000287
Mycosphaerella graminicola
fgenesh1_pm.C_chr_3000287
N
0.739
estExt_Genewise1Plus.C_30707
Thielavia terrestris
estExt_Genewise1Plus.C_30707
N
0.738
Pa_7_8390
Podospora anserina
Pa_7_8390
N
0.730