CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MCYG_03539
(
Microsporum canis
)
PUF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
PF00076 (RRM_1)
IPR001313
IPR000504
MCYG_03539
T25308_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_03539T0
RRM
472
533
LWIGSIPVSTTVTSLDAIFNVYGKIESTRVLTHKNCGFVNFERVESATQAKSLLNGKEIFPG
MCYG_03539T0
PUF
678
712
EMLPEIAELASDYLGNTVVQKLFEFCSEQAKEQML
MCYG_03539T0
PUF
715
749
IAPHLAEIGVHKNGTWAAQKIIDVSKVASQKQMIV
MCYG_03539T0
PUF
751
784
SLRPYTVPLFLDQYGNYVLQCCLRFGPPFNDFIF
MCYG_03539T0
PUF
786
821
TMLSRMWEISQGRFGARAMRACLESHHATKDQQRML
MCYG_03539T0
PUF
825
858
IALHSVQLATNANGALLLTWFLDTCTFPNRRTVL
Links
Other
PUF,RRM
family RBPs
Other
Microsporum canis
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_04970
Trichophyton rubrum
TERG_04970
N
0.992
ARB_03872
Arthroderma benhamiae
ARB_03872
N
0.992
MGYG_03148
Microsporum gypseum
MGYG_03148
N
0.992
TEQG_01260
Trichophyton equinum
TEQG_01260
N
0.992
TRV_06639
Trichophyton verrucosum
TRV_06639
N
0.987
TESG_05413
Trichophyton tonsurans
TESG_05413
N
0.987
CPSG_07974
Coccidioides posadasii
CPSG_07974
N
0.932
CIMG_00764
Coccidioides immitis
CIMG_00764
N
0.932
BDBG_08030
Blastomyces dermatitidis
BDBG_08030
N
0.924
PMAA_071510
Penicillium marneffei
PMAA_071510
N
0.920
HCAG_00994
Histoplasma capsulatum
HCAG_00994
N
0.920
PABG_04750
Paracoccidioides brasiliensis
PABG_04750
N
0.911
UREG_00739
Uncinocarpus reesii
UREG_00739
N
0.911
An02g13940
Aspergillus niger
CADANGAG00002920
N
0.907
AFLA_129760
Aspergillus flavus
CADAFLAG00010034
N
0.895
AO090001000672
Aspergillus oryzae
CADAORAG00000614
N
0.895
fgenesh1_pm.00082_#_71
Aspergillus carbonarius
fgenesh1_pm.00082_#_71
N
0.895
ACLA_089090
Aspergillus clavatus
CADACLAG00008911
N
0.895
NFIA_082330
Neosartorya fischeri
CADNFIAG00006734
N
0.895
Pc22g08770
Penicillium chrysogenum
Pc22g08770
N
0.890
AFUA_2G05610
Aspergillus fumigatus
CADAFUAG00003379
N
0.886
ANIA_07474
Aspergillus nidulans
CADANIAG00000567
N
0.882
ATEG_06748
Aspergillus terreus
CADATEAG00008207
N
0.865
GSTUMT00008056001
Tuber melanosporum
GSTUMT00008056001
N
0.810
CHGG_03262
Chaetomium globosum
CHGG_03262
N
0.810
estExt_fgenesh1_pm.C_60200
Neurospora tetrasperma
estExt_fgenesh1_pm.C_60200
N
0.810
NCU06199
Neurospora crassa
NCU06199
N
0.810
estExt_fgenesh3_pm.C_50632
Neurospora discreta
estExt_fgenesh3_pm.C_50632
N
0.806
MGG_06318
Magnaporthe oryzae
MGG_06318
N
0.803
gw1.1.1237.1
Trichoderma reesei
gw1.1.1237.1
N
0.802
e_gw1.3.863.1
Nectria haematococca
e_gw1.3.863.1
N
0.797
estExt_Genewise1Plus.C_40921
Myceliophthora thermophila
estExt_Genewise1Plus.C_40921
N
0.797
GLRG_00145
Colletotrichum graminicola
GLRG_00145
N
0.793
FVEG_08236
Fusarium verticillioides
FVEG_08236
N
0.789
FGSG_13028
Fusarium graminearum
FGSG_13028
N
0.785
FOXG_01859
Fusarium oxysporum
FOXG_01859
N
0.785
e_gw1.10.966.1
Trichoderma atroviride
e_gw1.10.966.1
N
0.781
VDAG_05840
Verticillium dahliae
VDAG_05840
N
0.776
VDBG_06774
Verticillium albo atrum
VDBG_06774
N
0.776
e_gw1.1.1743.1
Cryphonectria parasitica
e_gw1.1.1743.1
N
0.772
gw1.2.1414.1
Trichoderma virens
gw1.2.1414.1
N
0.772
SS1G_13666
Sclerotinia sclerotiorum
SS1G_13666
N
0.768
estExt_Genewise1Plus.C_10494
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_10494
N
0.768
SNOG_13737
Stagonospora nodorum
SNOG_13737
N
0.765
EAT78761.1
Phaeosphaeria nodorum
EAT78761.1
N
0.765
PTRG_10794
Pyrenophora tritici repentis
PTRG_10794
N
0.759
BC1G_15545
Botrytis cinerea
BC1G_15545
N
0.759
fgenesh1_pm.C_chr_3000287
Mycosphaerella graminicola
fgenesh1_pm.C_chr_3000287
N
0.735
Pa_7_8390
Podospora anserina
Pa_7_8390
N
0.722
estExt_Genewise1Plus.C_30707
Thielavia terrestris
estExt_Genewise1Plus.C_30707
N
0.722