CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_00739
(
Uncinocarpus reesii
)
PUF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
PF00076 (RRM_1)
IPR001313
IPR000504
UREG_00739
T25331_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_00739
RRM
412
473
LWIGSIPVSTTVTSLDAIFSMYGKIESTRVLTHKNCGFVNFERVESAIQAKSLLNGKEIFPG
URET_00739
PUF
615
649
SMLPEVAELSSDYLGNTVVQKLFEFCSEATKEELL
URET_00739
PUF
652
686
IAPYLAEIGVHKNGTWAAQKIIDVAKTHTQKQMIV
URET_00739
PUF
689
721
LRPYTVPLFLDQYGNYVLQCCLRFGSPYNDFIF
URET_00739
PUF
723
758
TMLSRMWEIAQGRFGARAMRACLESHHSTKDQQRML
URET_00739
PUF
762
795
IALHSVQLATNANGALLLTWFLDTCTFPHRRTVL
Links
Other
PUF,RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIMG_00764
Coccidioides immitis
CIMG_00764
N
0.966
CPSG_07974
Coccidioides posadasii
CPSG_07974
N
0.966
BDBG_08030
Blastomyces dermatitidis
BDBG_08030
N
0.920
HCAG_00994
Histoplasma capsulatum
HCAG_00994
N
0.911
An02g13940
Aspergillus niger
CADANGAG00002920
N
0.911
MGYG_03148
Microsporum gypseum
MGYG_03148
N
0.911
MCYG_03539
Microsporum canis
MCYG_03539
N
0.911
ARB_03872
Arthroderma benhamiae
ARB_03872
N
0.911
TEQG_01260
Trichophyton equinum
TEQG_01260
N
0.911
TERG_04970
Trichophyton rubrum
TERG_04970
N
0.911
ACLA_089090
Aspergillus clavatus
CADACLAG00008911
N
0.907
PMAA_071510
Penicillium marneffei
PMAA_071510
N
0.907
TESG_05413
Trichophyton tonsurans
TESG_05413
N
0.907
TRV_06639
Trichophyton verrucosum
TRV_06639
N
0.907
ANIA_07474
Aspergillus nidulans
CADANIAG00000567
N
0.903
PABG_04750
Paracoccidioides brasiliensis
PABG_04750
N
0.903
fgenesh1_pm.00082_#_71
Aspergillus carbonarius
fgenesh1_pm.00082_#_71
N
0.899
NFIA_082330
Neosartorya fischeri
CADNFIAG00006734
N
0.895
AO090001000672
Aspergillus oryzae
CADAORAG00000614
N
0.887
AFLA_129760
Aspergillus flavus
CADAFLAG00010034
N
0.887
Pc22g08770
Penicillium chrysogenum
Pc22g08770
N
0.882
ATEG_06748
Aspergillus terreus
CADATEAG00008207
N
0.878
AFUA_2G05610
Aspergillus fumigatus
CADAFUAG00003379
N
0.878
CHGG_03262
Chaetomium globosum
CHGG_03262
N
0.810
GSTUMT00008056001
Tuber melanosporum
GSTUMT00008056001
N
0.810
estExt_Genewise1Plus.C_40921
Myceliophthora thermophila
estExt_Genewise1Plus.C_40921
N
0.809
e_gw1.3.863.1
Nectria haematococca
e_gw1.3.863.1
N
0.801
MGG_06318
Magnaporthe oryzae
MGG_06318
N
0.798
FGSG_13028
Fusarium graminearum
FGSG_13028
N
0.793
estExt_fgenesh3_pm.C_50632
Neurospora discreta
estExt_fgenesh3_pm.C_50632
N
0.793
estExt_fgenesh1_pm.C_60200
Neurospora tetrasperma
estExt_fgenesh1_pm.C_60200
N
0.793
NCU06199
Neurospora crassa
NCU06199
N
0.793
VDAG_05840
Verticillium dahliae
VDAG_05840
N
0.792
VDBG_06774
Verticillium albo atrum
VDBG_06774
N
0.792
FVEG_08236
Fusarium verticillioides
FVEG_08236
N
0.789
GLRG_00145
Colletotrichum graminicola
GLRG_00145
N
0.789
FOXG_01859
Fusarium oxysporum
FOXG_01859
N
0.789
SS1G_13666
Sclerotinia sclerotiorum
SS1G_13666
N
0.785
gw1.1.1237.1
Trichoderma reesei
gw1.1.1237.1
N
0.781
BC1G_15545
Botrytis cinerea
BC1G_15545
N
0.772
e_gw1.10.966.1
Trichoderma atroviride
e_gw1.10.966.1
N
0.771
e_gw1.1.1743.1
Cryphonectria parasitica
e_gw1.1.1743.1
N
0.768
estExt_Genewise1Plus.C_10494
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_10494
N
0.759
SNOG_13737
Stagonospora nodorum
SNOG_13737
N
0.756
EAT78761.1
Phaeosphaeria nodorum
EAT78761.1
N
0.756
gw1.2.1414.1
Trichoderma virens
gw1.2.1414.1
N
0.751
PTRG_10794
Pyrenophora tritici repentis
PTRG_10794
N
0.751
estExt_Genewise1Plus.C_30707
Thielavia terrestris
estExt_Genewise1Plus.C_30707
N
0.730
fgenesh1_pm.C_chr_3000287
Mycosphaerella graminicola
fgenesh1_pm.C_chr_3000287
N
0.727
Pa_7_8390
Podospora anserina
Pa_7_8390
N
0.722