CIMG_03560 (Coccidioides immitis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CIMG_03560 T28660_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CIMG_03560T0 RRM 9 73
CIMG_03560T0 RRM 107 170
CIMG_03560T1 RRM 111 170
CIMG_03560T1 RRM 204 267

Links

Other RRM family RBPs
Other Coccidioides immitis RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02127.1 Alternaria brassicicola AB02127.1 N 0.719
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.795
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.838
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.832
AFUA_3G10100 Aspergillus fumigatus CADAFUAG00005849 N 0.730
An16g03890 Aspergillus niger CADANGAG00012860 N 0.847
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.838
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.817
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.740
CPSG_02395 Coccidioides posadasii CPSG_02395 N 1.000
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.779
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.779
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.773
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.765
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.718
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.756
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.701
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.720
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.725
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.847
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.765
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.758
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.758
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.765
HCAG_00086 Histoplasma capsulatum HCAG_00086 N 0.840
NCU07069 Neurospora crassa NCU07069 N 0.779
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.806
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.803
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.829
TESG_02526 Trichophyton tonsurans TESG_02526 N 0.790
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.750