e_gw1.18.2147.1 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.18.2147.1 T49826_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.18.2147.1 RRM 10 72
e_gw1.18.2147.1 RRM 104 168

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.947
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.947
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.924
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.922
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.916
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.916
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.891
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.848
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.841
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.838
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.838
NCU07069 Neurospora crassa NCU07069 N 0.833
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.833
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.833
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.826
Pa_4_8210 Podospora anserina Pa_4_8210 N 0.786
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.769
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.763
An16g03890 Aspergillus niger CADANGAG00012860 N 0.763
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.763
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.759
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.752
AB02127.1 Alternaria brassicicola AB02127.1 N 0.748
estExt_fgenesh1_pm.C_chr_20271 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_20271 N 0.745
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.743
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.740
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.740
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.722
CIMG_03560 Coccidioides immitis CIMG_03560 N 0.720
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.720
CPSG_02395 Coccidioides posadasii CPSG_02395 N 0.720