VDAG_04254 (Verticillium dahliae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDAG_04254 T31403_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_04254T0 RRM 9 79

Links

Other RRM family RBPs
Other Verticillium dahliae RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08285.1 Alternaria brassicicola AB08285.1 N 0.718
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.901
BDBG_05461 Blastomyces dermatitidis BDBG_05461 N 0.000
ACLA_080910 Aspergillus clavatus CADACLAG00007889 N 0.000
An12g04760 Aspergillus niger CADANGAG00009919 N 0.000
ANIA_06074 Aspergillus nidulans CADANIAG00006943 N 0.000
CIMG_01023 Coccidioides immitis CIMG_01023 N 0.000
CPSG_02191 Coccidioides posadasii CPSG_02191 N 0.000
EAT89416.2 Phaeosphaeria nodorum EAT89416.2 N 0.718
estExt_fgenesh1_pg.C_160182 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160182 N 0.718
estExt_fgenesh3_kg.C_70160 Neurospora discreta estExt_fgenesh3_kg.C_70160 N 0.873
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.887
estExt_Genewise1Plus.C_50197 Neurospora tetrasperma estExt_Genewise1Plus.C_50197 N 0.873
e_gw1.1.4045.1 Trichoderma atroviride e_gw1.1.4045.1 N 0.887
e_gw1.4.400.1 Trichoderma reesei e_gw1.4.400.1 N 0.887
e_gw1.4.931.1 Thielavia terrestris e_gw1.4.931.1 N 0.859
e_gw1.6.1433.1 Cryphonectria parasitica e_gw1.6.1433.1 N 0.915
e_gw1.7.1285.1 Trichoderma virens e_gw1.7.1285.1 N 0.887
fgenesh1_pg.C_scaffold_8000060 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_8000060 N 0.746
fgenesh1_pg.sca_1_chr1_3_0000632 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000632 N 0.873
fgenesh1_pm.00772_#_139 Aspergillus carbonarius fgenesh1_pm.00772_#_139 N 0.000
FGSG_00370 Fusarium graminearum FGSG_00370 N 0.859
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.873
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.873
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.944
GSTUMT00004863001 Tuber melanosporum GSTUMT00004863001 N 0.817
HCAG_03684 Histoplasma capsulatum HCAG_03684 N 0.000
MGG_09885 Magnaporthe oryzae MGG_09885 N 0.915
NCU03311 Neurospora crassa NCU03311 N 0.873
PABG_01625 Paracoccidioides brasiliensis PABG_01625 N 0.000
Pa_1_6970 Podospora anserina Pa_1_6970 N 0.775
PMAA_029040 Penicillium marneffei PMAA_029040 N 0.000
SNOG_02685 Stagonospora nodorum SNOG_02685 N 0.718
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.915
UREG_00968 Uncinocarpus reesii UREG_00968 N 0.704