GSTUMT00004863001 (Tuber melanosporum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSTUMT00004863001 T56932_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSTUMT00004863001 RRM 12 82

Links

Other RRM family RBPs
Other Tuber melanosporum RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.859
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.859
estExt_fgenesh3_kg.C_70160 Neurospora discreta estExt_fgenesh3_kg.C_70160 N 0.845
estExt_Genewise1Plus.C_50197 Neurospora tetrasperma estExt_Genewise1Plus.C_50197 N 0.845
NCU03311 Neurospora crassa NCU03311 N 0.845
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.831
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.817
e_gw1.4.931.1 Thielavia terrestris e_gw1.4.931.1 N 0.817
VDAG_04254 Verticillium dahliae VDAG_04254 N 0.817
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.817
e_gw1.6.1433.1 Cryphonectria parasitica e_gw1.6.1433.1 N 0.817
fgenesh1_pg.sca_1_chr1_3_0000632 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000632 N 0.817
MGG_09885 Magnaporthe oryzae MGG_09885 N 0.803
FGSG_00370 Fusarium graminearum FGSG_00370 N 0.803
e_gw1.1.4045.1 Trichoderma atroviride e_gw1.1.4045.1 N 0.789
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.789
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.789
e_gw1.4.400.1 Trichoderma reesei e_gw1.4.400.1 N 0.789
e_gw1.7.1285.1 Trichoderma virens e_gw1.7.1285.1 N 0.789
Pa_1_6970 Podospora anserina Pa_1_6970 N 0.732
ENSSSCG00000010430 Sus scrofa ENSSSCG00000010430 N 0.718
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.718
CSTF2 Takifugu rubripes ENSTRUG00000004323 N 0.718
CSTF2T Tursiops truncatus ENSTTRG00000003341 N 0.718
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.718
ENSSSCG00000009884 Sus scrofa ENSSSCG00000009884 N 0.718
CSTF2 Tetraodon nigroviridis ENSTNIG00000016860 N 0.718
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.718
CSTF2T Spermophilus tridecemlineatus ENSSTOG00000005624 N 0.718
CSTF2T Procavia capensis ENSPCAG00000000046 N 0.718
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.718
ENSPPYG00000002441 Pongo pygmaeus ENSPPYG00000002441 N 0.718
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.718
CSTF2T Pan troglodytes ENSPTRG00000002510 N 0.718
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.718
D3ZKA4_RAT Rattus norvegicus ENSRNOG00000022436 N 0.718
CSTF2T Pteropus vampyrus ENSPVAG00000006274 N 0.718
CSTF2T Sorex araneus ENSSARG00000002013 N 0.718
GK14167 Drosophila willistoni FBgn0216173 N 0.718
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.718
GE25546 Drosophila yakuba FBgn0242611 N 0.718
CSTF2 Oryzias latipes ENSORLG00000001380 N 0.718
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.718
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.718
Ame_R018612 Ailuropoda melanoleuca Ame_R018612 N 0.718
BGIBMGA006476 Bombyx mori BGIBMGA006476 N 0.718
EAT89416.2 Phaeosphaeria nodorum EAT89416.2 N 0.718
GJ10336 Drosophila virilis FBgn0197622 N 0.718
GD19237 Drosophila simulans FBgn0190742 N 0.718
GG22991 Drosophila erecta FBgn0115148 N 0.718
GF16912 Drosophila ananassae FBgn0093932 N 0.718
GA20525-RA Drosophila pseudoobscura FBgn0080519 N 0.718
GH18352 Drosophila grimshawi FBgn0125820 N 0.718
GI23336 Drosophila mojavensis FBgn0146063 N 0.718
GM17877 Drosophila sechellia FBgn0172784 N 0.718
GL24357 Drosophila persimilis FBgn0161947 N 0.718
CstF-64 Drosophila melanogaster FBgn0027841 N 0.718
Cstf2t Mus musculus ENSMUSG00000053536 N 0.718
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.718
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.718
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.718
CSTF2T Callithrix jacchus ENSCJAG00000005033 N 0.718
ENSCPOG00000004195 Cavia porcellus ENSCPOG00000004195 N 0.718
CSTF2 Felis catus ENSFCAG00000007000 N 0.718
cstf2 Danio rerio ENSDARG00000044009 N 0.718
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.718
CSTF2T Canis familiaris ENSCAFG00000015567 N 0.718
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.718
AAH80037 Xenopus laevis AAH80037 N 0.718
AAH41291 Xenopus laevis AAH41291 N 0.718
AAB50269 Xenopus laevis AAB50269 N 0.718
SNOG_02685 Stagonospora nodorum SNOG_02685 N 0.718
amel4_ncbi_hmm3649 Apis mellifera amel4_ncbi_hmm3649 N 0.718
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.718
nasonia_NCBI_hmm235054 Nasonia vitripennis nasonia_NCBI_hmm235054 N 0.718
DGIL_AUG5s2502g11t1 Acyrtosiphon pisum DGIL_AUG5s2502g11t1 N 0.718
CSTF2T Felis catus ENSFCAG00000013011 N 0.718
CSTF2T Choloepus hoffmanni ENSCHOG00000011888 N 0.718
CSTF2 Homo sapiens ENSG00000101811 N 0.718
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.718
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.718
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.718
CSTF2T Myotis lucifugus ENSMLUG00000011187 N 0.718
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.718
Cstf2 Mus musculus ENSMUSG00000031256 N 0.718
CSTF2T Macaca mulatta ENSMMUG00000010845 N 0.718
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.718
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.718
ENSGGOG00000022117 Gorilla gorilla ENSGGOG00000022117 N 0.718
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.718
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.718
CSTF2 Gasterosteus aculeatus ENSGACG00000017326 N 0.718
CSTF2T Homo sapiens ENSG00000177613 N 0.718
CSTF2T Loxodonta africana ENSLAFG00000002058 N 0.718
ENSGGOG00000026139 Gorilla gorilla ENSGGOG00000026139 N 0.718
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.718
Glyma10g36350.1 Glycine max Glyma10g36350.1 N 0.704
MDP0000142436 Malus x domestica MDP0000142436 N 0.704
MDP0000283046 Malus x domestica MDP0000283046 N 0.704
Glyma20g31220.1 Glycine max Glyma20g31220.1 N 0.704
ppa004010m Prunus persica ppa004010m N 0.704
AB08285.1 Alternaria brassicicola AB08285.1 N 0.704
LjSGA_018671.1 Lotus japonicus LjSGA_018671.1 N 0.704
XM_002887343.1 Arabidopsis lyrata Al_scaffold_0002_1857 N 0.704
112541 Helobdella robusta 112541 N 0.704
SNAPOd2T00016915001 Oikopleura dioica SNAPOd2T00016915001 N 0.704
ISCW015573 Ixodes scapularis ISCW015573 N 0.704
Cucsa.364140 Cucumis sativus Cucsa.364140 N 0.704
CSTF64 Arabidopsis thaliana AT1G71800-TAIR-G N 0.704
estExt_fgenesh1_pg.C_160182 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160182 N 0.704
PK22244.1 Cannabis sativa PK22244.1 N 0.704
DGIL_AUG5s12011g4t1 Acyrtosiphon pisum DGIL_AUG5s12011g4t1 N 0.704
RO3G_14170 Rhizopus oryzae RO3G_14170 N 0.704