CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE29496
(
Caenorhabditis remanei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CRE29496
T34479_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE29496
RRM
257
327
LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNEKSCEQAFFKMDNVLIDDRRIH
Links
Other
RRM
family RBPs
Other
Caenorhabditis remanei
RBPs
164 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pg.scaffold_10000040
Physcomitrella patens
fgenesh1_pg.scaffold_10000040
N
0.000
fgenesh1_pg.scaffold_102000051
Physcomitrella patens
fgenesh1_pg.scaffold_102000051
N
0.000
fgenesh1_pg.scaffold_132000015
Physcomitrella patens
fgenesh1_pg.scaffold_132000015
N
0.000
fgenesh1_pg.scaffold_14000231
Physcomitrella patens
fgenesh1_pg.scaffold_14000231
N
0.000
fgenesh1_pg.scaffold_157000047
Physcomitrella patens
fgenesh1_pg.scaffold_157000047
N
0.000
fgenesh1_pg.scaffold_170000020
Physcomitrella patens
fgenesh1_pg.scaffold_170000020
N
0.000
fgenesh1_pg.scaffold_17000233
Physcomitrella patens
fgenesh1_pg.scaffold_17000233
N
0.000
fgenesh1_pg.scaffold_192000022
Physcomitrella patens
fgenesh1_pg.scaffold_192000022
N
0.000
fgenesh1_pg.scaffold_21000015
Physcomitrella patens
fgenesh1_pg.scaffold_21000015
N
0.000
fgenesh1_pg.scaffold_262000019
Physcomitrella patens
fgenesh1_pg.scaffold_262000019
N
0.000
fgenesh1_pg.scaffold_272000001
Physcomitrella patens
fgenesh1_pg.scaffold_272000001
N
0.000
fgenesh1_pg.scaffold_340000028
Physcomitrella patens
fgenesh1_pg.scaffold_340000028
N
0.000
fgenesh1_pg.scaffold_357000042
Physcomitrella patens
fgenesh1_pg.scaffold_357000042
N
0.000
fgenesh1_pg.scaffold_36000076
Physcomitrella patens
fgenesh1_pg.scaffold_36000076
N
0.000
fgenesh1_pg.scaffold_80000116
Physcomitrella patens
fgenesh1_pg.scaffold_80000116
N
0.000
fgenesh1_pg.scaffold_81000126
Physcomitrella patens
fgenesh1_pg.scaffold_81000126
N
0.000
fgenesh1_pg.scaffold_84000013
Physcomitrella patens
fgenesh1_pg.scaffold_84000013
N
0.000