ENSCPOG00000026604 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000026604 T35924_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NONO
M309_0.6 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
490_12403470 		0.803
NONO
M307_0.6 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
488_9001221 		0.803
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000018462 RRM 83 142
ENSCPOP00000018462 RRM 152 217

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45128 Xenopus laevis AAH45128 I 0.702
Ame_R017809 Ailuropoda melanoleuca Ame_R017809 I 0.803
BAE54372 Xenopus laevis BAE54372 I 0.702
NONO Anolis carolinensis ENSACAG00000015026 I 0.740
Q2KJ42_BOVIN Bos taurus ENSBTAG00000012152 I 0.803
LOC607081 Canis familiaris ENSCAFG00000003207 I 0.803
ENSCAFG00000013766 Canis familiaris ENSCAFG00000013766 I 0.748
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.803
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.773
TAF1 Callithrix jacchus ENSCJAG00000013390 I 0.803
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.803
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.795
NONO Equus caballus ENSECAG00000008502 I 0.803
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.803
NONO Homo sapiens ENSG00000147140 D 0.803
Q5ZIZ5_CHICK Gallus gallus ENSGALG00000005507 I 0.786
NONO Gorilla gorilla ENSGGOG00000006194 I 0.803
NONO Loxodonta africana ENSLAFG00000013422 I 0.803
NONO Macropus eugenii ENSMEUG00000004294 I 0.789
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.786
NONO Microcebus murinus ENSMICG00000000232 I 0.803
NONO Myotis lucifugus ENSMLUG00000002489 I 0.795
LOC697263 Macaca mulatta ENSMMUG00000020481 I 0.803
NONO Monodelphis domestica ENSMODG00000004445 I 0.795
Nono Mus musculus ENSMUSG00000031311 I 0.803
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.803
NONO Otolemur garnettii ENSOGAG00000004834 I 0.803
NONO Procavia capensis ENSPCAG00000002541 I 0.803
ENSPPYG00000020451 Pongo pygmaeus ENSPPYG00000020451 I 0.803
XR_025068.1 Pan troglodytes ENSPTRG00000022010 I 0.803
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.803
Nono Rattus norvegicus ENSRNOG00000003689 I 0.803
NONO Sorex araneus ENSSARG00000007959 I 0.795
NONO Spermophilus tridecemlineatus ENSSTOG00000015869 I 0.789
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.786
NONO Tursiops truncatus ENSTTRG00000009605 I 0.803
NONO Vicugna pacos ENSVPAG00000002272 I 0.803
nono Xenopus tropicalis ENSXETG00000020868 I 0.725