RBM46 (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000002141 T39446_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.950
ENSGALG00000014267
M234_0.6 		Gallus gallus GAUGAW RNAcompete
Ray et al.(2013)
RNCMPT00279 		0.702
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000003396 RRM 63 131
ENSOANP00000003396 RRM 143 210
ENSOANP00000003396 RRM 238 302
ENSOANP00000003397 RRM 1 60
ENSOANP00000003397 RRM 72 139
ENSOANP00000003397 RRM 167 231

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

85 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017652 Ailuropoda melanoleuca Ame_R017652 I 0.714
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.950
RBM47 Anolis carolinensis ENSACAG00000011833 I 0.714
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.955
RBM46 Bos taurus ENSBTAG00000001696 I 0.946
A5D9E0_BOVIN Bos taurus ENSBTAG00000002356 I 0.714
RBM46 Canis familiaris ENSCAFG00000008473 I 0.950
RBM47_CANFA Canis familiaris ENSCAFG00000015898 I 0.709
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.950
RBM47 Choloepus hoffmanni ENSCHOG00000011731 I 0.714
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.946
LOC100410421 Callithrix jacchus ENSCJAG00000019385 I 0.714
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.936
RBM47 Cavia porcellus ENSCPOG00000014100 I 0.714
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.906
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.926
RBM47 Danio rerio ENSDARG00000061985 I 0.719
rbm46 Danio rerio ENSDARG00000079452 I 0.802
RBM47 Dasypus novemcinctus ENSDNOG00000006858 I 0.714
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.950
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.934
LOC100063743 Equus caballus ENSECAG00000004400 I 0.704
RBM46 Equus caballus ENSECAG00000007649 I 0.946
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.916
RBM47 Echinops telfairi ENSETEG00000009194 I 0.714
RBM46 Echinops telfairi ENSETEG00000014902 I 0.950
RBM46 Felis catus ENSFCAG00000009246 I 0.936
RBM47 Felis catus ENSFCAG00000012399 I 0.714
RBM46 Homo sapiens ENSG00000151962 D 0.950
RBM47 Homo sapiens ENSG00000163694 I 0.714
RBM46 Gallus gallus ENSGALG00000009278 I 0.842
ENSGALG00000014267 Gallus gallus ENSGALG00000014267 D 0.719
RBM47 Gorilla gorilla ENSGGOG00000001367 I 0.714
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.950
RBM47 Loxodonta africana ENSLAFG00000011998 I 0.714
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.946
RBM47 Macropus eugenii ENSMEUG00000009516 I 0.724
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.950
RBM46 Meleagris gallopavo ENSMGAG00000001457 I 0.759
RBM47 Meleagris gallopavo ENSMGAG00000012226 I 0.719
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.946
RBM47 Macaca mulatta ENSMMUG00000012036 I 0.714
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.950
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.950
ENSMODG00000007003 Monodelphis domestica ENSMODG00000007003 I 0.724
Rbm46 Mus musculus ENSMUSG00000033882 I 0.941
Rbm47 Mus musculus ENSMUSG00000070780 I 0.709
RBM47 Ornithorhynchus anatinus ENSOANG00000008978 I 0.709
RBM47 Oryctolagus cuniculus ENSOCUG00000012034 I 0.714
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.950
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.866
RBM46 Oryzias latipes ENSORLG00000002429 I 0.707
RBM47 Oryzias latipes ENSORLG00000005847 I 0.709
RBM47 Procavia capensis ENSPCAG00000011879 I 0.714
ENSPPYG00000014688 Pongo pygmaeus ENSPPYG00000014688 I 0.706
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.950
RBM47 Pan troglodytes ENSPTRG00000016006 I 0.714
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.950
RBM47 Pteropus vampyrus ENSPVAG00000003812 I 0.714
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.950
Rbm47 Rattus norvegicus ENSRNOG00000002408 I 0.709
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.950
RBM47 Sorex araneus ENSSARG00000001735 I 0.714
RBM46 Sorex araneus ENSSARG00000006520 I 0.950
RBM47 Sus scrofa ENSSSCG00000008796 I 0.714
RBM46 Sus scrofa ENSSSCG00000008994 I 0.950
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.936
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.886
RBM47 Taeniopygia guttata ENSTGUG00000008705 I 0.719
RBM47 Tetraodon nigroviridis ENSTNIG00000006127 I 0.704
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.732
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.756
RBM47 Takifugu rubripes ENSTRUG00000014050 I 0.704
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.946
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.936
RBM47 Tursiops truncatus ENSTTRG00000002839 I 0.714
ENSXETG00000012802 Xenopus tropicalis ENSXETG00000012802 D 0.709
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.823
estExt_Genewise1Plus.C_20056 Capitella teleta estExt_Genewise1Plus.C_20056 I 0.727
e_gw.262.16.1 Branchiostoma floridae e_gw.262.16.1 I 0.701
e_gw.262.30.1 Branchiostoma floridae e_gw.262.30.1 I 0.704
e_gw.60.249.1 Branchiostoma floridae e_gw.60.249.1 I 0.709
XP_001196183.1 Strongylocentrotus purpuratus XP_001196183.1 I 0.714
XP_781163.1 Strongylocentrotus purpuratus XP_781163.1 I 0.714