PABP5_PANTR (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000022078 T40784_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC5
M162_0.6 		Homo sapiens AGAAADU RNAcompete
Ray et al.(2013)
RNCMPT00171 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000037984 RRM 37 106
ENSPTRP00000037984 RRM 140 208
ENSPTRP00000056253 RRM 20 90
ENSPTRP00000056253 RRM 108 176
ENSPTRP00000056253 RRM 201 270
ENSPTRP00000056253 RRM 304 372

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_10382 Chaetomium globosum CHGG_10382 N 0.000
estExt_Genewise1.C_170171 Neurospora tetrasperma estExt_Genewise1.C_170171 N 0.000
estExt_Genewise1Plus.C_100354 Neurospora discreta estExt_Genewise1Plus.C_100354 N 0.000
estExt_Genewise1Plus.C_61440 Thielavia terrestris estExt_Genewise1Plus.C_61440 N 0.000
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.000
NCU08518 Neurospora crassa NCU08518 N 0.000
Pa_3_7140 Podospora anserina Pa_3_7140 N 0.000