PABPC5 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000009733 T38536_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC5
M162_0.6 		Homo sapiens AGAAADU RNAcompete
Ray et al.(2013)
RNCMPT00171 		0.839
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000008860 RRM 20 90
ENSMICP00000008860 RRM 108 176
ENSMICP00000008860 RRM 201 270
ENSMICP00000008860 RRM 304 339

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPC5 Tupaia belangeri ENSTBEG00000016482 I 0.846
PABPC5 Equus caballus ENSECAG00000003452 I 0.842
PABPC5 Pteropus vampyrus ENSPVAG00000006465 I 0.842
PABPC5 Bos taurus ENSBTAG00000019942 I 0.839
PABPC5 Homo sapiens ENSG00000174740 D 0.839
PABPC5 Gorilla gorilla ENSGGOG00000007622 I 0.839
Ame_R017927 Ailuropoda melanoleuca Ame_R017927 I 0.839
PABP5_MACMU Macaca mulatta ENSMMUG00000011562 I 0.839
ENSPPYG00000020526 Pongo pygmaeus ENSPPYG00000020526 I 0.839
PABPC5 Oryctolagus cuniculus ENSOCUG00000010919 I 0.839
PABP5_PANTR Pan troglodytes ENSPTRG00000022078 I 0.839
PABPC5 Otolemur garnettii ENSOGAG00000006882 I 0.835
LOC100360473 Rattus norvegicus ENSRNOG00000003354 I 0.835
Q95M35_CALJA Callithrix jacchus ENSCJAG00000003665 I 0.832
PABPC5 Vicugna pacos ENSVPAG00000001063 I 0.832
Pabpc5 Mus musculus ENSMUSG00000034732 I 0.832
Pabpc5 Dipodomys ordii ENSDORG00000001035 I 0.824
PABPC5 Sorex araneus ENSSARG00000014012 I 0.817
PABPC5 Cavia porcellus ENSCPOG00000002555 I 0.810