U2SURP (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000012767 T42106_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000015740 RRM 197 270

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R004744 Ailuropoda melanoleuca Ame_R004744 N 0.959
U2SURP Anolis carolinensis ENSACAG00000009512 N 0.959
Q148C6_BOVIN Bos taurus ENSBTAG00000009154 N 0.959
U2SURP Canis familiaris ENSCAFG00000007973 N 0.947
U2SURP Choloepus hoffmanni ENSCHOG00000001300 N 0.959
LOC100411013 Callithrix jacchus ENSCJAG00000001639 N 0.959
U2SURP Cavia porcellus ENSCPOG00000011656 N 0.959
U2SURP Danio rerio ENSDARG00000061490 N 0.986
zgc:163098 Danio rerio ENSDARG00000078911 N 0.720
U2SURP Dasypus novemcinctus ENSDNOG00000006427 N 0.959
LOC100051188 Equus caballus ENSECAG00000022460 N 0.959
U2SURP Erinaceus europaeus ENSEEUG00000013553 N 0.959
U2SURP Echinops telfairi ENSETEG00000000149 N 0.959
U2SURP Homo sapiens ENSG00000163714 N 0.959
U2SURP Gasterosteus aculeatus ENSGACG00000003763 N 0.986
LOC424773 Gallus gallus ENSGALG00000002612 N 0.959
U2SURP Gorilla gorilla ENSGGOG00000005563 N 0.959
U2SURP Loxodonta africana ENSLAFG00000002566 N 0.959
U2SURP Macropus eugenii ENSMEUG00000000127 N 0.959
U2SURP Meleagris gallopavo ENSMGAG00000006549 N 0.959
U2SURP Microcebus murinus ENSMICG00000008681 N 0.838
U2SURP Myotis lucifugus ENSMLUG00000002920 N 0.959
U2SURP Macaca mulatta ENSMMUG00000002775 N 0.959
ENSMODG00000010847 Monodelphis domestica ENSMODG00000010847 N 0.853
XM_001372164.1 Monodelphis domestica ENSMODG00000021242 N 0.959
2610101N10Rik Mus musculus ENSMUSG00000032407 N 0.959
U2SURP Ornithorhynchus anatinus ENSOANG00000003644 N 0.959
U2SURP Oryctolagus cuniculus ENSOCUG00000012121 N 0.959
U2SURP Otolemur garnettii ENSOGAG00000004335 N 0.838
U2SURP Oryzias latipes ENSORLG00000010235 N 1.000
U2SURP Procavia capensis ENSPCAG00000015251 N 0.959
ENSPPYG00000014178 Pongo pygmaeus ENSPPYG00000014178 N 0.959
U2SURP Pan troglodytes ENSPTRG00000015489 N 0.959
U2SURP Pteropus vampyrus ENSPVAG00000016077 N 0.959
RGD1307882 Rattus norvegicus ENSRNOG00000008607 N 0.959
U2SURP Sorex araneus ENSSARG00000013779 N 0.838
U2SURP Sus scrofa ENSSSCG00000011684 N 0.959
U2SURP Spermophilus tridecemlineatus ENSSTOG00000015997 N 0.827
U2SURP Tupaia belangeri ENSTBEG00000016313 N 0.959
U2SURP Taeniopygia guttata ENSTGUG00000008687 N 0.959
U2SURP Takifugu rubripes ENSTRUG00000017810 N 1.000
U2SURP Tursiops truncatus ENSTTRG00000017170 N 0.959
U2SURP Vicugna pacos ENSVPAG00000004697 N 0.959
sr140 Xenopus tropicalis ENSXETG00000022133 N 0.959
estExt_fgenesh2_pm.C_3790010 Branchiostoma floridae estExt_fgenesh2_pm.C_3790010 N 0.747
estExt_Genewise1.C_650028 Daphnia pulex estExt_Genewise1.C_650028 N 0.720
e_gw1.134.6.1 Lottia gigantea e_gw1.134.6.1 N 0.707
Sjc_0023880 Schistosoma japonicum Sjc_0023880 N 0.707
Smp_161730 Schistosoma mansoni Smp_161730 N 0.707
XP_001179024.1 Strongylocentrotus purpuratus XP_001179024.1 N 0.773
XP_794306.2 Strongylocentrotus purpuratus XP_794306.2 N 0.773