Sjc_0023880 (Schistosoma japonicum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sjc_0023880 T54783_0.6 SDSPB (2008-Sep-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000002241 RRM 235 308

Links

Other RRM family RBPs
Other Schistosoma japonicum RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Smp_161730 Schistosoma mansoni Smp_161730 N 1.000
e_gw1.134.6.1 Lottia gigantea e_gw1.134.6.1 N 0.784
e_gw1.11.101.1 Capitella teleta e_gw1.11.101.1 N 0.770
BGIBMGA003602 Bombyx mori BGIBMGA003602 N 0.770
PHUM176690 Pediculus humanus PHUM176690 N 0.757
DGIL_AUG5s8618g4t1 Acyrtosiphon pisum DGIL_AUG5s8618g4t1 N 0.730
DGIL_AUG5s11505g3t1 Acyrtosiphon pisum DGIL_AUG5s11505g3t1 N 0.730
amel4_ncbi_hmm17771 Apis mellifera amel4_ncbi_hmm17771 N 0.730
XP_002166978.1 Hydra magnipapillata XP_002166978.1 N 0.730
amel4_ncbi_hmm17771 Tribolium castaneum amel4_ncbi_hmm17771 N 0.730
U2SURP Gasterosteus aculeatus ENSGACG00000003763 N 0.720
GH20523 Drosophila grimshawi FBgn0127986 N 0.716
GG22076 Drosophila erecta FBgn0114251 N 0.716
CG9346 Drosophila melanogaster FBgn0034572 N 0.716
GI21069 Drosophila mojavensis FBgn0143801 N 0.716
zgc:163098 Danio rerio ENSDARG00000078911 N 0.716
GM15794 Drosophila sechellia FBgn0170710 N 0.716
estExt_Genewise1.C_650028 Daphnia pulex estExt_Genewise1.C_650028 N 0.716
GK22959 Drosophila willistoni FBgn0224921 N 0.716
GJ21992 Drosophila virilis FBgn0209106 N 0.716
GE12157 Drosophila yakuba FBgn0229923 N 0.716
GD11555 Drosophila simulans FBgn0183296 N 0.716
RGD1307882 Rattus norvegicus ENSRNOG00000008607 N 0.707
U2SURP Pan troglodytes ENSPTRG00000015489 N 0.707
U2SURP Procavia capensis ENSPCAG00000015251 N 0.707
ENSPPYG00000014178 Pongo pygmaeus ENSPPYG00000014178 N 0.707
U2SURP Sus scrofa ENSSSCG00000011684 N 0.707
U2SURP Pteropus vampyrus ENSPVAG00000016077 N 0.707
U2SURP Tetraodon nigroviridis ENSTNIG00000012767 N 0.707
sr140 Xenopus tropicalis ENSXETG00000022133 N 0.707
U2SURP Oryzias latipes ENSORLG00000010235 N 0.707
U2SURP Vicugna pacos ENSVPAG00000004697 N 0.707
U2SURP Tursiops truncatus ENSTTRG00000017170 N 0.707
U2SURP Taeniopygia guttata ENSTGUG00000008687 N 0.707
U2SURP Takifugu rubripes ENSTRUG00000017810 N 0.707
U2SURP Tupaia belangeri ENSTBEG00000016313 N 0.707
U2SURP Myotis lucifugus ENSMLUG00000002920 N 0.707
U2SURP Cavia porcellus ENSCPOG00000011656 N 0.707
U2SURP Dasypus novemcinctus ENSDNOG00000006427 N 0.707
LOC100051188 Equus caballus ENSECAG00000022460 N 0.707
U2SURP Erinaceus europaeus ENSEEUG00000013553 N 0.707
LOC100411013 Callithrix jacchus ENSCJAG00000001639 N 0.707
U2SURP Choloepus hoffmanni ENSCHOG00000001300 N 0.707
Ame_R004744 Ailuropoda melanoleuca Ame_R004744 N 0.707
U2SURP Anolis carolinensis ENSACAG00000009512 N 0.707
Q148C6_BOVIN Bos taurus ENSBTAG00000009154 N 0.707
U2SURP Canis familiaris ENSCAFG00000007973 N 0.707
U2SURP Oryctolagus cuniculus ENSOCUG00000012121 N 0.707
U2SURP Echinops telfairi ENSETEG00000000149 N 0.707
U2SURP Macaca mulatta ENSMMUG00000002775 N 0.707
XM_001372164.1 Monodelphis domestica ENSMODG00000021242 N 0.707
2610101N10Rik Mus musculus ENSMUSG00000032407 N 0.707
U2SURP Ornithorhynchus anatinus ENSOANG00000003644 N 0.707
U2SURP Homo sapiens ENSG00000163714 N 0.707
U2SURP Meleagris gallopavo ENSMGAG00000006549 N 0.707
LOC424773 Gallus gallus ENSGALG00000002612 N 0.707
U2SURP Macropus eugenii ENSMEUG00000000127 N 0.707
U2SURP Gorilla gorilla ENSGGOG00000005563 N 0.707
U2SURP Loxodonta africana ENSLAFG00000002566 N 0.707
estExt_fgenesh2_pm.C_3790010 Branchiostoma floridae estExt_fgenesh2_pm.C_3790010 N 0.703
ENSMODG00000010847 Monodelphis domestica ENSMODG00000010847 N 0.703
CpipJ_CPIJ014539 Culex pipiens CpipJ_CPIJ014539 N 0.703
AAEL012045 Aedes aegypti AAEL012045 N 0.703
CPIJ014539 Culex quinquefasciatus CPIJ014539 N 0.703