Q8QGJ7_FUGRU (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000005907 T42243_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.918
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.871
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.871
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.871
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.806
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000014384 RRM 13 83
ENSTRUP00000014384 RRM 101 169
ENSTRUP00000014384 RRM 193 262
ENSTRUP00000014384 RRM 296 364
ENSTRUP00000014385 RRM 13 83
ENSTRUP00000014385 RRM 101 169
ENSTRUP00000014385 RRM 193 262
ENSTRUP00000014385 RRM 296 364
ENSTRUP00000014386 RRM 13 83
ENSTRUP00000014386 RRM 101 169
ENSTRUP00000014386 RRM 193 262
ENSTRUP00000014386 RRM 296 364

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

166 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44992 Xenopus laevis AAH44992 N 0.000
Ame_R008667 Ailuropoda melanoleuca Ame_R008667 N 0.000
Ame_R019926 Ailuropoda melanoleuca Ame_R019926 N 0.000
TAB2 Anolis carolinensis ENSACAG00000006999 N 0.000
TAB2 Bos taurus ENSBTAG00000013454 N 0.000
TAB2 Canis familiaris ENSCAFG00000000373 N 0.000
TAB3 Canis familiaris ENSCAFG00000013747 N 0.000
TAB3 Callithrix jacchus ENSCJAG00000007710 N 0.000
TAB2 Callithrix jacchus ENSCJAG00000019580 N 0.000
TAB3 Cavia porcellus ENSCPOG00000004407 N 0.000
TAB2 Cavia porcellus ENSCPOG00000015012 N 0.000
tab3 Danio rerio ENSDARG00000062063 N 0.000
TAB3 Dasypus novemcinctus ENSDNOG00000002862 N 0.000
TAB2 Dasypus novemcinctus ENSDNOG00000005946 N 0.000
Tab2 Dipodomys ordii ENSDORG00000000707 N 0.000
LOC100051087 Equus caballus ENSECAG00000017444 N 0.000
TAB2 Equus caballus ENSECAG00000017989 N 0.000
TAB2 Erinaceus europaeus ENSEEUG00000004162 N 0.000
TAB2 Echinops telfairi ENSETEG00000010784 N 0.000
TAB3 Echinops telfairi ENSETEG00000013753 N 0.000
TAB3 Felis catus ENSFCAG00000006233 N 0.000
TAB2 Felis catus ENSFCAG00000011287 N 0.000
TAB2 Homo sapiens ENSG00000055208 N 0.000
TAB3 Homo sapiens ENSG00000157625 N 0.000
TAB2 Gasterosteus aculeatus ENSGACG00000006629 N 0.000
ENSGACG00000010107 Gasterosteus aculeatus ENSGACG00000010107 N 0.000
MAP3K7IP2 Gallus gallus ENSGALG00000012356 N 0.000
TAB2 Gorilla gorilla ENSGGOG00000016734 N 0.000
TAB3 Gorilla gorilla ENSGGOG00000025392 N 0.000
TAB3 Loxodonta africana ENSLAFG00000011430 N 0.000
TAB2 Loxodonta africana ENSLAFG00000028106 N 0.000
TAB2 Meleagris gallopavo ENSMGAG00000012593 N 0.000
TAB3 Meleagris gallopavo ENSMGAG00000014639 N 0.000
TAB3 Microcebus murinus ENSMICG00000010825 N 0.000
TAB3 Myotis lucifugus ENSMLUG00000000437 N 0.000
TAB2 Myotis lucifugus ENSMLUG00000005344 N 0.000
TAB3 Macaca mulatta ENSMMUG00000013981 N 0.000
MAP3K7IP2 Macaca mulatta ENSMMUG00000014995 N 0.000
TAB2 Monodelphis domestica ENSMODG00000016831 N 0.000
TAB3 Monodelphis domestica ENSMODG00000021127 N 0.000
Tab2 Mus musculus ENSMUSG00000015755 N 0.000
Tab3 Mus musculus ENSMUSG00000035476 N 0.000
TAB2 Ornithorhynchus anatinus ENSOANG00000001062 N 0.000
TAB3 Ornithorhynchus anatinus ENSOANG00000010902 N 0.000
TAB3 Oryctolagus cuniculus ENSOCUG00000007836 N 0.000
TAB2 Oryctolagus cuniculus ENSOCUG00000012180 N 0.000
TAB3 Otolemur garnettii ENSOGAG00000008205 N 0.000
TAB3 Ochotona princeps ENSOPRG00000002406 N 0.000
TAB2 Ochotona princeps ENSOPRG00000014017 N 0.000
ENSORLG00000005575 Oryzias latipes ENSORLG00000005575 N 0.000
TAB2 Oryzias latipes ENSORLG00000015273 N 0.000
TAB3 Procavia capensis ENSPCAG00000001132 N 0.000
TAB2 Procavia capensis ENSPCAG00000015182 N 0.000
ENSPPYG00000017085 Pongo pygmaeus ENSPPYG00000017085 N 0.000
TAB2 Pan troglodytes ENSPTRG00000018690 N 0.000
XR_022720.1 Pan troglodytes ENSPTRG00000021771 N 0.000
TAB2 Pteropus vampyrus ENSPVAG00000000744 N 0.000
Map3k7ip2 Rattus norvegicus ENSRNOG00000016054 N 0.000
TAB2 Sorex araneus ENSSARG00000010468 N 0.000
TAB3 Sorex araneus ENSSARG00000011882 N 0.000
TAB2 Sus scrofa ENSSSCG00000004110 N 0.000
TAB3 Sus scrofa ENSSSCG00000012203 N 0.000
TAB2 Spermophilus tridecemlineatus ENSSTOG00000008729 N 0.000
TAB3 Spermophilus tridecemlineatus ENSSTOG00000008764 N 0.000
TAB3 Tupaia belangeri ENSTBEG00000009424 N 0.000
TAB2 Tupaia belangeri ENSTBEG00000010237 N 0.000
MAP3K7IP2 Taeniopygia guttata ENSTGUG00000010670 N 0.000
TAB2 Tetraodon nigroviridis ENSTNIG00000002705 N 0.000
ENSTNIG00000015537 Tetraodon nigroviridis ENSTNIG00000015537 N 0.000
TAB2 Takifugu rubripes ENSTRUG00000007732 N 0.000
ENSTRUG00000017685 Takifugu rubripes ENSTRUG00000017685 N 0.000
TAB3 Tarsius syrichta ENSTSYG00000002270 N 0.000
TAB2 Tursiops truncatus ENSTTRG00000000705 N 0.000
TAB3 Tursiops truncatus ENSTTRG00000007031 N 0.000
TAB2 Vicugna pacos ENSVPAG00000010086 N 0.000
tab3 Xenopus tropicalis ENSXETG00000010567 N 0.000
tab2 Xenopus tropicalis ENSXETG00000021389 N 0.000
fgenesh2_pg.C_sca_6000167 Lottia gigantea fgenesh2_pg.C_sca_6000167 N 0.000
Q7ZXH3 Xenopus laevis Q7ZXH3 N 0.000