GJ21812 (Drosophila virilis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0208930 T44103_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Cnot4
M008_0.6 		Drosophila melanogaster ASACAHW RNAcompete
Ray et al.(2013)
RNCMPT00008 		0.974
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0236229 RRM 111 187

Links

Other RRM family RBPs
Other Drosophila virilis RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08315.1 Alternaria brassicicola AB08315.1 N 0.000
ADR062W Ashbya gossypii ADR062W N 0.000
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.000
AFLA_103810 Aspergillus flavus CADAFLAG00012116 N 0.000
AFUA_3G05570 Aspergillus fumigatus CADAFUAG00005783 N 0.000
An11g11070 Aspergillus niger CADANGAG00009424 N 0.000
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.000
AO090020000028 Aspergillus oryzae CADAORAG00006562 N 0.000
ATEG_08978 Aspergillus terreus CADATEAG00006440 N 0.000
NFIA_071620 Neosartorya fischeri CADNFIAG00006536 N 0.000
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.000
CIMG_10872 Coccidioides immitis CIMG_10872 N 0.000
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.000
CPSG_06815 Coccidioides posadasii CPSG_06815 N 0.000
CTRG_02259 Candida tropicalis CTRG_02259 N 0.000
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.000
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.000
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.000
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.000
fgenesh1_pm.00118_#_26 Aspergillus carbonarius fgenesh1_pm.00118_#_26 N 0.000
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.000
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.000
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.000
gw1.2.2109.1 Mucor circinelloides gw1.2.2109.1 N 0.000
HCAG_10294 Histoplasma capsulatum HCAG_10294 N 0.000
MCYG_08235 Microsporum canis MCYG_08235 N 0.000
MGYG_05636 Microsporum gypseum MGYG_05636 N 0.000
orf19.7385 Candida albicans orf19.7385 N 0.000
PABG_05614 Paracoccidioides brasiliensis PABG_05614 N 0.000
Pc20g08250 Penicillium chrysogenum Pc20g08250 N 0.000
PMAA_005110 Penicillium marneffei PMAA_005110 N 0.000
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.000
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.000
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.000
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.000
TEQG_01582 Trichophyton equinum TEQG_01582 N 0.000
TERG_02518 Trichophyton rubrum TERG_02518 N 0.000
UREG_06970 Uncinocarpus reesii UREG_06970 N 0.000
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.000
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.000
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.000
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.000