PHUM268300 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM268300 T45339_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM268300-PA RRM 241 311

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

183 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
83285 Helobdella robusta 83285 N 0.746
AAEL005541 Aedes aegypti AAEL005541 N 0.803
AAEL005690 Aedes aegypti AAEL005690 N 0.803
AB03196.1 Alternaria brassicicola AB03196.1 N 0.789
AGAP008136 Anopheles gambiae AGAP008136 N 0.817
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.803
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.803
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.761
Aqu1.223583 Amphimedon queenslandica Aqu1.223583 N 0.789
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.789
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.775
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.789
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.789
CBG12494 Caenorhabditis briggsae CBG12494 N 0.732
CBN08292 Caenorhabditis brenneri CBN08292 N 0.746
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.817
CJA06296 Caenorhabditis japonica CJA06296 N 0.746
CNBG_1409 Cryptococcus neoformans CNBG_1409 N 0.746
CPIJ000912 Culex quinquefasciatus CPIJ000912 N 0.789
CpipJ_CPIJ000912 Culex pipiens CpipJ_CPIJ000912 N 0.789
CRE29496 Caenorhabditis remanei CRE29496 N 0.746
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.789
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.775
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.761
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.761
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.761
PPIL4 Callithrix jacchus ENSCJAG00000019613 N 0.750
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.775
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.761
ppil4 Danio rerio ENSDARG00000043854 N 0.761
PPIL4 Equus caballus ENSECAG00000021819 N 0.761
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.746
PPIL4 Homo sapiens ENSG00000131013 N 0.761
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.761
PPIL4 Gallus gallus ENSGALG00000012364 N 0.789
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.761
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.761
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.789
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.761
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.761
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.761
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.775
Ppil4 Mus musculus ENSMUSG00000015757 N 0.761
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.789
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.761
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.761
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.761
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.775
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.761
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.761
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.761
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.761
PPIL4 Sorex araneus ENSSARG00000011244 N 0.761
PPIL4 Spermophilus tridecemlineatus ENSSTOG00000013980 N 0.732
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.775
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.803
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.803
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.761
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.761
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.775
estExt_fgenesh1_kg.C_170006 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_170006 N 0.789
estExt_fgenesh1_kg.C_40083 Melampsora laricis populina estExt_fgenesh1_kg.C_40083 N 0.746
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.761
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.817
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.746
estExt_fgenesh3_pm.C_240021 Chlorella NC64A estExt_fgenesh3_pm.C_240021 N 0.000
estExt_Genewise1.C_180101 Capitella teleta estExt_Genewise1.C_180101 N 0.746
estExt_Genewise1.C_23809 Thielavia terrestris estExt_Genewise1.C_23809 N 0.775
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.817
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.746
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.831
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.746
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.746
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.789
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.775
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.761
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.817
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.761
e_gw1.20.215.1 Phycomyces blakesleeanus e_gw1.20.215.1 N 0.732
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.761
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.775
e_gww1.4.788.1 Laccaria bicolor e_gww1.4.788.1 N 0.746
e_gww2.22.65.1 Phanerochaete chrysosporium e_gww2.22.65.1 N 0.761
sig-7 Caenorhabditis elegans F39H2.2 N 0.746
CG5808 Drosophila melanogaster FBgn0027617 N 0.789
GF18772 Drosophila ananassae FBgn0095789 N 0.817
GG12319 Drosophila erecta FBgn0104609 N 0.789
GH18460 Drosophila grimshawi FBgn0125927 N 0.817
GI24038 Drosophila mojavensis FBgn0146761 N 0.817
GL13859 Drosophila persimilis FBgn0151464 N 0.817
GM23461 Drosophila sechellia FBgn0178328 N 0.789
GD18267 Drosophila simulans FBgn0189800 N 0.789
GJ23668 Drosophila virilis FBgn0210765 N 0.817
GK13166 Drosophila willistoni FBgn0215175 N 0.775
GE10772 Drosophila yakuba FBgn0228614 N 0.789
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.817
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.761
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.761
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.775
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.775
fgenesh2_pm.4_#_1016 Serpula lacrymans fgenesh2_pm.4_#_1016 N 0.732
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.746
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.803
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.775
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.789
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.789
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.732
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.831
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.761
LOAG_08216 Loa loa LOAG_08216 N 0.746
MCYG_06073 Microsporum canis MCYG_06073 N 0.789
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.803
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.775
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.831
NCU10166 Neurospora crassa NCU10166 N 0.831
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.831
Pc21g11960 Penicillium chrysogenum Pc21g11960 N 0.803
PGTG_10482 Puccinia graminis PGTG_10482 N 0.746
PGTG_14680 Puccinia graminis PGTG_14680 N 0.732
PMAA_010740 Penicillium marneffei PMAA_010740 N 0.803
PredSwiss_ASS2010_933.2 Pneumocystis carinii PredSwiss_ASS2010_933.2 N 0.718
PredSwiss_CON599.3 Pneumocystis carinii PredSwiss_CON599.3 N 0.718
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.789
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.775
PTTG_06854 Puccinia triticina PTTG_06854 N 0.732
RO3G_06974 Rhizopus oryzae RO3G_06974 N 0.746
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.732
Sjc_0091550 Schistosoma japonicum Sjc_0091550 N 0.746
Smp_165540 Schistosoma mansoni Smp_165540 N 0.746
SNAPOd2T00004354001 Oikopleura dioica SNAPOd2T00004354001 N 0.732
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.789
SOCG_02586 Schizosaccharomyces octosporus SOCG_02586 N 0.732
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.761
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.732
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.803
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.789
TERG_06028 Trichophyton rubrum TERG_06028 N 0.789
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.789
UM03490 Ustilago maydis UM03490 N 0.718
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.761
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.761
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.775
XP_001180629.1 Strongylocentrotus purpuratus XP_001180629.1 N 0.746
XP_001192414.1 Strongylocentrotus purpuratus XP_001192414.1 N 0.746
XP_782627.2 Strongylocentrotus purpuratus XP_782627.2 N 0.746
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.746