EuGene.0000060244 (Micromonas pusilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 EuGene.0000060244 T51678_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
EuGene.0000060244 RRM 67 137

Links

Other RRM family RBPs
Other Micromonas pusilla RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30169.m006469 Ricinus communis 30169.m006469 N 0.704
amel4_ncbi_hmm2170 Apis mellifera amel4_ncbi_hmm2170 I 0.732
Y14 Arabidopsis thaliana AT1G51510-TAIR-G N 0.704
BGIOSIBCE017506 Oryza indica BGIOSIBCE017506 N 0.704
cassava2157.valid.m1 Manihot esculenta cassava2157.valid.m1 N 0.732
cassava30654.valid.m1 Manihot esculenta cassava30654.valid.m1 N 0.704
Cucsa.055310 Cucumis sativus Cucsa.055310 N 0.704
estExt_fgenesh2_pg.C_4600002 Branchiostoma floridae estExt_fgenesh2_pg.C_4600002 I 0.732
EuGene.0600010284 Ostreococcus RCC809 EuGene.0600010284 N 0.746
e_gw.27.177.1 Nematostella vectensis e_gw.27.177.1 N 0.775
e_gw.589.3.1 Branchiostoma floridae e_gw.589.3.1 I 0.732
e_gw1.06.00.460.1 Ostreococcus tauri e_gw1.06.00.460.1 N 0.718
e_gw1.136.78.1 Physcomitrella patens e_gw1.136.78.1 N 0.775
e_gw1.23.492.1 Selaginella moellendorfii e_gw1.23.492.1 N 0.746
e_gw1.31.212.1 Physcomitrella patens e_gw1.31.212.1 N 0.775
e_gw1.53.304.1 Lottia gigantea e_gw1.53.304.1 I 0.718
e_gw1.6.577.1 Heterobasidion annosum e_gw1.6.577.1 N 0.732
GSVIVG00026504001 Vitis vinifera GSVIVG00026504001 N 0.718
gw.10.199.1 Nematostella vectensis gw.10.199.1 N 0.775
gw.617.10.1 Nematostella vectensis gw.617.10.1 N 0.775
gwEuk.6.623.1 Ostreococcus lucimarinus gwEuk.6.623.1 N 0.761
LOC_Os05g04850 Oryza sativa LOC_Os05g04850 N 0.704
MDP0000238271 Malus x domestica MDP0000238271 N 0.704
MDP0000242810 Malus x domestica MDP0000242810 N 0.704
MDP0000242811 Malus x domestica MDP0000242811 N 0.704
nasonia_NCBI_hmm460663 Nasonia vitripennis nasonia_NCBI_hmm460663 I 0.775
PK01699.1 Cannabis sativa PK01699.1 N 0.732
ppa007553m Prunus persica ppa007553m N 0.704
XM_002894275.1 Arabidopsis lyrata scaffold_104917.1 N 0.746