gw1.47.198.1 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.47.198.1 T53278_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.47.198.1 RRM 4 73
gw1.47.198.1 RRM 95 160

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29889.m003323 Ricinus communis 29889.m003323 N 0.743
FCA Arabidopsis thaliana AT4G16280-TAIR-G N 0.700
cassava42168.valid.m1 Manihot esculenta cassava42168.valid.m1 N 0.748
cassava42169.valid.m1 Manihot esculenta cassava42169.valid.m1 N 0.748
Cucsa.247020 Cucumis sativus Cucsa.247020 N 0.770
e_gw1.114.188.1 Selaginella moellendorfii e_gw1.114.188.1 N 0.739
e_gw1.158.95.1 Physcomitrella patens e_gw1.158.95.1 N 0.950
XM_002868098.1 Arabidopsis lyrata fgenesh2_kg.7__2690__AT4G16280.3 N 0.707
Glyma07g36630.1 Glycine max Glyma07g36630.1 N 0.736
Glyma17g03960.1 Glycine max Glyma17g03960.1 N 0.729
GSVIVG00034966001 Vitis vinifera GSVIVG00034966001 N 0.729
Medtr8g136920 Medicago truncatula Medtr8g136920 N 0.714
PK18808.1 Cannabis sativa PK18808.1 N 0.727
ppa002369m Prunus persica ppa002369m N 0.755