29889.m003323 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 29889.m003323 T48703_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
29889.m003323 RRM 163 231
29889.m003323 RRM 254 323

Links

Other RRM family RBPs
Other Ricinus communis RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava42168.valid.m1 Manihot esculenta cassava42168.valid.m1 N 0.921
cassava42169.valid.m1 Manihot esculenta cassava42169.valid.m1 N 0.921
Glyma17g03960.1 Glycine max Glyma17g03960.1 N 0.900
Cucsa.247020 Cucumis sativus Cucsa.247020 N 0.900
GSVIVG00034966001 Vitis vinifera GSVIVG00034966001 N 0.899
Glyma07g36630.1 Glycine max Glyma07g36630.1 N 0.893
ppa002369m Prunus persica ppa002369m N 0.886
PK18808.1 Cannabis sativa PK18808.1 N 0.864
chr4.CM0333.80.nd Lotus japonicus chr4.CM0333.80.nd N 0.863
FCA Arabidopsis thaliana AT4G16280-TAIR-G N 0.856
Medtr8g136920 Medicago truncatula Medtr8g136920 N 0.843
XM_002868098.1 Arabidopsis lyrata fgenesh2_kg.7__2690__AT4G16280.3 N 0.835
FCA Oryza sativa LOC_Os09g03610 N 0.791
Sb02g014690 Sorghum bicolor Sb02g014690 N 0.791
BGIOSIBCE029031 Oryza indica BGIOSIBCE029031 N 0.791
GRMZM2G065276 Zea mays GRMZM2G065276 N 0.784
e_gw1.158.95.1 Physcomitrella patens e_gw1.158.95.1 N 0.757
BRADI4G08727 Brachypodium distachyon BRADI4G08727 N 0.745
gw1.47.198.1 Physcomitrella patens gw1.47.198.1 N 0.743
GSVIVG00028149001 Vitis vinifera GSVIVG00028149001 N 0.736
MDP0000211002 Malus x domestica MDP0000211002 N 0.712