Medtr8g136920 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr8g136920 T54615_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr8g136920.1 RRM 166 235
Medtr8g136920.1 RRM 257 326

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma07g36630.1 Glycine max Glyma07g36630.1 N 0.943
Glyma17g03960.1 Glycine max Glyma17g03960.1 N 0.936
chr4.CM0333.80.nd Lotus japonicus chr4.CM0333.80.nd N 0.893
ppa002369m Prunus persica ppa002369m N 0.871
Cucsa.247020 Cucumis sativus Cucsa.247020 N 0.850
GSVIVG00034966001 Vitis vinifera GSVIVG00034966001 N 0.850
PK18808.1 Cannabis sativa PK18808.1 N 0.850
29889.m003323 Ricinus communis 29889.m003323 N 0.843
cassava42169.valid.m1 Manihot esculenta cassava42169.valid.m1 N 0.814
cassava42168.valid.m1 Manihot esculenta cassava42168.valid.m1 N 0.814
FCA Arabidopsis thaliana AT4G16280-TAIR-G N 0.757
GRMZM2G065276 Zea mays GRMZM2G065276 N 0.750
XM_002868098.1 Arabidopsis lyrata fgenesh2_kg.7__2690__AT4G16280.3 N 0.750
BGIOSIBCE029031 Oryza indica BGIOSIBCE029031 N 0.743
FCA Oryza sativa LOC_Os09g03610 N 0.743
Sb02g014690 Sorghum bicolor Sb02g014690 N 0.736
e_gw1.158.95.1 Physcomitrella patens e_gw1.158.95.1 N 0.729
gw1.47.198.1 Physcomitrella patens gw1.47.198.1 N 0.714
GSVIVG00028149001 Vitis vinifera GSVIVG00028149001 N 0.707