mgf015667m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf015667m T53747_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf015667m RRM 266 331
mgf015667m RRM 351 416
mgf015667m RRM 789 860

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
28350.m000106 Ricinus communis 28350.m000106 N 0.853
29693.m002077 Ricinus communis 29693.m002077 N 0.824
30147.m014409 Ricinus communis 30147.m014409 N 0.877
XM_002893514.1 Arabidopsis lyrata Al_scaffold_0001_2998 N 0.824
ML5 Arabidopsis thaliana AT1G29400-TAIR-G N 0.819
ML2 Arabidopsis thaliana AT2G42890-TAIR-G N 0.711
BGIOSIBCE006715 Oryza indica BGIOSIBCE006715 N 0.755
BGIOSIBCE007174 Oryza indica BGIOSIBCE007174 N 0.828
BGIOSIBCE008451 Oryza indica BGIOSIBCE008451 N 0.810
BRADI1G52280 Brachypodium distachyon BRADI1G52280 N 0.814
BRADI3G10967 Brachypodium distachyon BRADI3G10967 N 0.770
BRADI3G44380 Brachypodium distachyon BRADI3G44380 N 0.858
BRADI5G08580 Brachypodium distachyon BRADI5G08580 N 0.716
cassava12910.valid.m1 Manihot esculenta cassava12910.valid.m1 N 0.838
cassava13647.valid.m1 Manihot esculenta cassava13647.valid.m1 N 0.814
cassava13648.valid.m1 Manihot esculenta cassava13648.valid.m1 N 0.814
cassava37261.valid.m1 Manihot esculenta cassava37261.valid.m1 N 0.755
cassava37262.valid.m1 Manihot esculenta cassava37262.valid.m1 N 0.755
cassava42352.valid.m1 Manihot esculenta cassava42352.valid.m1 N 0.843
cassava42353.valid.m1 Manihot esculenta cassava42353.valid.m1 N 0.843
cassava42354.valid.m1 Manihot esculenta cassava42354.valid.m1 N 0.843
cassava42355.valid.m1 Manihot esculenta cassava42355.valid.m1 N 0.843
cassava44897.m1 Manihot esculenta cassava44897.m1 N 0.843
cassava6429.valid.m1 Manihot esculenta cassava6429.valid.m1 N 0.848
chr6.CM0037.1500.nc Lotus japonicus chr6.CM0037.1500.nc N 0.848
Cucsa.047430 Cucumis sativus Cucsa.047430 N 0.819
Cucsa.185450 Cucumis sativus Cucsa.185450 N 0.854
Cucsa.349210 Cucumis sativus Cucsa.349210 N 0.907
estExt_fgenesh2_pg.C_120305 Selaginella moellendorfii estExt_fgenesh2_pg.C_120305 N 0.858
estExt_gwp_gw1.C_780034 Physcomitrella patens estExt_gwp_gw1.C_780034 N 0.868
e_gw1.12.24.1 Selaginella moellendorfii e_gw1.12.24.1 N 0.868
e_gw1.271.39.1 Physcomitrella patens e_gw1.271.39.1 N 0.868
e_gw1.78.82.1 Physcomitrella patens e_gw1.78.82.1 N 0.868
XM_002870025.1 Arabidopsis lyrata fgenesh2_kg.7__2489__AT4G18120.1 N 0.706
Glyma08g01040.1 Glycine max Glyma08g01040.1 N 0.784
Glyma08g42230.1 Glycine max Glyma08g42230.1 N 0.848
Glyma09g11630.1 Glycine max Glyma09g11630.1 N 0.843
Glyma15g23420.1 Glycine max Glyma15g23420.1 N 0.858
Glyma18g12730.1 Glycine max Glyma18g12730.1 N 0.853
GRMZM2G004455 Zea mays GRMZM2G004455 N 0.819
GRMZM2G012302 Zea mays GRMZM2G012302 N 0.810
GRMZM2G154229 Zea mays GRMZM2G154229 N 0.824
GRMZM2G451716 Zea mays GRMZM2G451716 N 0.725
GSVIVG00001086001 Vitis vinifera GSVIVG00001086001 N 0.892
GSVIVG00008646001 Vitis vinifera GSVIVG00008646001 N 0.882
GSVIVG00021379001 Vitis vinifera GSVIVG00021379001 N 0.863
LOC_Os02g21430 Oryza sativa LOC_Os02g21430 N 0.755
LOC_Os02g31290 Oryza sativa LOC_Os02g31290 N 0.828
LOC_Os02g48790 Oryza sativa LOC_Os02g48790 N 0.810
MDP0000157627 Malus x domestica MDP0000157627 N 0.701
Medtr2g056620 Medicago truncatula Medtr2g056620 N 0.838
Medtr3g151260 Medicago truncatula Medtr3g151260 N 0.750
mgf000415m Mimulus guttatus mgf000415m N 1.000
mgf005765m Mimulus guttatus mgf005765m N 0.824
mgf014747m Mimulus guttatus mgf014747m N 0.839
mgf023970m Mimulus guttatus mgf023970m N 0.789
PK15886.1 Cannabis sativa PK15886.1 N 0.926
PK19379.1 Cannabis sativa PK19379.1 N 0.789
PK24656.1 Cannabis sativa PK24656.1 N 0.843
PK25465.1 Cannabis sativa PK25465.1 N 0.873
B9GMT5_POPTR Populus trichocarpa POPTR_0001s13030 N 0.824
B9GT36_POPTR Populus trichocarpa POPTR_0002s06070 N 0.838
B9GZ23_POPTR Populus trichocarpa POPTR_0003s16110 N 0.809
B9H813_POPTR Populus trichocarpa POPTR_0005s22370 N 0.843
B9I403_POPTR Populus trichocarpa POPTR_0012s10900 N 0.843
ppa000845m Prunus persica ppa000845m N 0.887
ppa000997m Prunus persica ppa000997m N 0.828
ppa001307m Prunus persica ppa001307m N 0.843
ppa001327m Prunus persica ppa001327m N 0.858
SB04G021130 Sorghum bicolor Sb04g021130 N 0.829
SB06G014670 Sorghum bicolor Sb06g014670 N 0.716
SB10G000350 Sorghum bicolor Sb10g000350 N 0.824