AC202489_30 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AC202489_30 T54416_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AC202489_30.1 RRM 217 287
AC202489_30.1 RRM 297 365
AC202489_30.1 RRM 394 461

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
72885 Helobdella robusta 72885 N 0.000
AAF81070 Xenopus laevis AAF81070 I 0.000
AAH44956 Xenopus laevis AAH44956 I 0.000
AAH72792 Xenopus laevis AAH72792 I 0.000
AAH72812 Xenopus laevis AAH72812 I 0.000
AAP42281 Xenopus laevis AAP42281 I 0.000
amel4_ncbi_hmm7752 Apis mellifera amel4_ncbi_hmm7752 I 0.000
CAB96420 Xenopus laevis CAB96420 I 0.000
RBM24 Anolis carolinensis ENSACAG00000003962 I 0.000
RBM38 Bos taurus ENSBTAG00000008105 I 0.000
RBM24 Canis familiaris ENSCAFG00000009942 N 0.000
RBM24 Callithrix jacchus ENSCJAG00000006579 I 0.000
LOC100404144 Callithrix jacchus ENSCJAG00000019139 I 0.000
RBM24 Cavia porcellus ENSCPOG00000008838 I 0.000
RBM38 Cavia porcellus ENSCPOG00000012781 I 0.000
ENSCSAVG00000001132 Ciona savignyi ENSCSAVG00000001132 I 0.000
rbm24b Danio rerio ENSDARG00000031809 I 0.000
ENSDARG00000058818 Danio rerio ENSDARG00000058818 D 0.000
ENSDARG00000075681 Danio rerio ENSDARG00000075681 I 0.000
rbm24a Danio rerio ENSDARG00000078293 I 0.000
RBM38 Erinaceus europaeus ENSEEUG00000013489 I 0.000
RBM24 Homo sapiens ENSG00000112183 D 0.000
RBM38 Homo sapiens ENSG00000132819 I 0.000
RBM24 Gasterosteus aculeatus ENSGACG00000005383 I 0.000
RBM24 Gasterosteus aculeatus ENSGACG00000008472 I 0.000
RBM38 Gasterosteus aculeatus ENSGACG00000009873 N 0.000
RBM38 Gasterosteus aculeatus ENSGACG00000015224 I 0.000
RBM24 Gallus gallus ENSGALG00000012712 I 0.000
RBM24 Gorilla gorilla ENSGGOG00000013628 I 0.000
RBM24 Loxodonta africana ENSLAFG00000000116 I 0.000
RBM24 Microcebus murinus ENSMICG00000011880 I 0.000
RBM24 Myotis lucifugus ENSMLUG00000016451 I 0.000
RBM38 Macaca mulatta ENSMMUG00000031391 I 0.000
RBM24 Monodelphis domestica ENSMODG00000010899 I 0.000
RBM38 Monodelphis domestica ENSMODG00000016458 I 0.000
Rbm38 Mus musculus ENSMUSG00000027510 D 0.000
Rbm24 Mus musculus ENSMUSG00000038132 I 0.000
RBM38 Ornithorhynchus anatinus ENSOANG00000009259 I 0.000
RBM24 Ornithorhynchus anatinus ENSOANG00000011865 I 0.000
RBM24 Ochotona princeps ENSOPRG00000012150 I 0.000
RBM24 Oryzias latipes ENSORLG00000007916 I 0.000
RBM38 Oryzias latipes ENSORLG00000012154 I 0.000
RBM24 Oryzias latipes ENSORLG00000012546 I 0.000
RBM24 Procavia capensis ENSPCAG00000015152 I 0.000
ENSPPYG00000016256 Pongo pygmaeus ENSPPYG00000016256 I 0.000
RBM38 Pan troglodytes ENSPTRG00000013661 I 0.000
RBM24 Pan troglodytes ENSPTRG00000017749 I 0.000
RBM24 Pteropus vampyrus ENSPVAG00000004954 I 0.000
D3ZGE9_RAT Rattus norvegicus ENSRNOG00000006420 I 0.000
Rbm24 Rattus norvegicus ENSRNOG00000016925 I 0.000
RBM24 Sus scrofa ENSSSCG00000001066 I 0.000
RBM38 Sus scrofa ENSSSCG00000007504 I 0.000
RBM38 Tupaia belangeri ENSTBEG00000001689 I 0.000
RBM24 Taeniopygia guttata ENSTGUG00000005984 I 0.000
RBM38 Tetraodon nigroviridis ENSTNIG00000007093 I 0.000
ENSTNIG00000009181 Tetraodon nigroviridis ENSTNIG00000009181 D 0.000
RBM24 Tetraodon nigroviridis ENSTNIG00000018417 I 0.000
RBM38 Takifugu rubripes ENSTRUG00000004291 I 0.000
RBM24 Takifugu rubripes ENSTRUG00000010089 I 0.000
RBM38 Takifugu rubripes ENSTRUG00000010969 I 0.000
RBM24 Takifugu rubripes ENSTRUG00000014826 I 0.000
RBM24 Tursiops truncatus ENSTTRG00000000393 I 0.000
rbm38 Xenopus tropicalis ENSXETG00000011268 I 0.000
rbm24 Xenopus tropicalis ENSXETG00000024618 I 0.000
estExt_Genewise1.C_490050 Capitella teleta estExt_Genewise1.C_490050 I 0.000
e_gw.482.10.1 Branchiostoma floridae e_gw.482.10.1 I 0.000
e_gw.63.59.1 Branchiostoma floridae e_gw.63.59.1 I 0.000
gw1.63.188.1 Daphnia pulex gw1.63.188.1 I 0.000
gw1.9.44.1 Lottia gigantea gw1.9.44.1 I 0.000
LOAG_12553 Loa loa LOAG_12553 I 0.000
nasonia_NCBI_hmm626184 Nasonia vitripennis nasonia_NCBI_hmm626184 I 0.000
Q6GQD3 Xenopus laevis Q6GQD3 I 0.000
Q7T3I7 Xenopus laevis Q7T3I7 I 0.000
Q9I8B3 Xenopus laevis Q9I8B3 I 0.000
sup-12 Caenorhabditis elegans T22B2.4 D 0.000
WUBG_00807 Wuchereria bancrofti WUBG_00807 I 0.000