CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PMAA_028810
(
Penicillium marneffei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PMAA_028810
T58267_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_028810.t1
RRM
13
80
LFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIANNTKGTAFVVYEDVMDSKQACDKLNGFNFQNRYLV
Links
Other
RRM
family RBPs
Other
Penicillium marneffei
RBPs
47 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pg.C_scaffold_212000013
Daphnia pulex
fgenesh1_pg.C_scaffold_212000013
N
0.000
Genemark.2570_g
Serpula lacrymans
Genemark.2570_g
N
0.000
PGTG_03172
Puccinia graminis
PGTG_03172
N
0.000
PGTG_03348
Puccinia graminis
PGTG_03348
N
0.000
PGTG_05307
Puccinia graminis
PGTG_05307
N
0.000
PGTG_05406
Puccinia graminis
PGTG_05406
N
0.000
PGTG_09834
Puccinia graminis
PGTG_09834
N
0.000
PGTG_12045
Puccinia graminis
PGTG_12045
N
0.000
PGTG_12646
Puccinia graminis
PGTG_12646
N
0.000
PGTG_14567
Puccinia graminis
PGTG_14567
N
0.000
PGTG_15116
Puccinia graminis
PGTG_15116
N
0.000
PGTG_16335
Puccinia graminis
PGTG_16335
N
0.000
PGTG_18613
Puccinia graminis
PGTG_18613
N
0.000
PGTG_20442
Puccinia graminis
PGTG_20442
N
0.000
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.000
PTTG_03874
Puccinia triticina
PTTG_03874
N
0.000
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.000
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.000
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.000
PTTG_07469
Puccinia triticina
PTTG_07469
N
0.000
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.000
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.000
PTTG_08777
Puccinia triticina
PTTG_08777
N
0.000
PTTG_09518
Puccinia triticina
PTTG_09518
N
0.000
PTTG_09789
Puccinia triticina
PTTG_09789
N
0.000
PTTG_10278
Puccinia triticina
PTTG_10278
N
0.000
PTTG_10451
Puccinia triticina
PTTG_10451
N
0.000
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.000
PTTG_10713
Puccinia triticina
PTTG_10713
N
0.000
PTTG_10751
Puccinia triticina
PTTG_10751
N
0.000
PTTG_10809
Puccinia triticina
PTTG_10809
N
0.000
PTTG_11057
Puccinia triticina
PTTG_11057
N
0.000
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.000
PTTG_11278
Puccinia triticina
PTTG_11278
N
0.000
PTTG_11299
Puccinia triticina
PTTG_11299
N
0.000
PTTG_11462
Puccinia triticina
PTTG_11462
N
0.000
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.000