PGTG_16335 (Puccinia graminis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PGTG_16335 T08214_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_16335 CCHC ZF 271 288

Links

Other CCHC ZF family RBPs
Other Puccinia graminis RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_12646 Puccinia graminis PGTG_12646 N 1.000
PGTG_09834 Puccinia graminis PGTG_09834 N 0.944
PGTG_18613 Puccinia graminis PGTG_18613 N 0.944
PGTG_03348 Puccinia graminis PGTG_03348 N 0.944
PGTG_03172 Puccinia graminis PGTG_03172 N 0.944
PGTG_05408 Puccinia graminis PGTG_05408 N 0.944
PGTG_15116 Puccinia graminis PGTG_15116 N 0.944
PGTG_14567 Puccinia graminis PGTG_14567 N 0.944
PGTG_20442 Puccinia graminis PGTG_20442 N 0.944
PGTG_05307 Puccinia graminis PGTG_05307 N 0.889
PGTG_12045 Puccinia graminis PGTG_12045 N 0.889
PGTG_05406 Puccinia graminis PGTG_05406 N 0.833
PTTG_10451 Puccinia triticina PTTG_10451 N 0.833
PTTG_11563 Puccinia triticina PTTG_11563 N 0.778
PTTG_08777 Puccinia triticina PTTG_08777 N 0.778
PTTG_11462 Puccinia triticina PTTG_11462 N 0.778
PTTG_03874 Puccinia triticina PTTG_03874 N 0.778
PTTG_11068 Puccinia triticina PTTG_11068 N 0.778
PTTG_10552 Puccinia triticina PTTG_10552 N 0.778
Genemark.2570_g Serpula lacrymans Genemark.2570_g N 0.778
PTTG_11278 Puccinia triticina PTTG_11278 N 0.722
PTTG_08330 Puccinia triticina PTTG_08330 N 0.722
PTTG_07469 Puccinia triticina PTTG_07469 N 0.722
PTTG_07033 Puccinia triticina PTTG_07033 N 0.722
PTTG_01306 Puccinia triticina PTTG_01306 N 0.722
PTTG_09789 Puccinia triticina PTTG_09789 N 0.722
PTTG_10278 Puccinia triticina PTTG_10278 N 0.722
PTTG_11299 Puccinia triticina PTTG_11299 N 0.722
PTTG_10809 Puccinia triticina PTTG_10809 N 0.722
PTTG_10713 Puccinia triticina PTTG_10713 N 0.722
fgenesh1_pg.C_scaffold_212000013 Daphnia pulex fgenesh1_pg.C_scaffold_212000013 N 0.722