LOC100397686 (Callithrix jacchus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 ENSCJAG00000018257 T60296_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000033833 S1 1 71
ENSCJAP00000033833 S1 91 159
ENSCJAP00000033833 S1 262 335
ENSCJAP00000033833 S1 353 424
ENSCJAP00000033833 S1 445 503
ENSCJAP00000033833 S1 538 611
ENSCJAP00000033833 S1 845 913
ENSCJAP00000033833 S1 959 1035
ENSCJAP00000033833 S1 1039 1111
ENSCJAP00000033849 S1 80 134
ENSCJAP00000033849 S1 183 258
ENSCJAP00000033849 S1 278 346
ENSCJAP00000033849 S1 449 522
ENSCJAP00000033849 S1 540 611
ENSCJAP00000033849 S1 632 690
ENSCJAP00000033849 S1 725 798
ENSCJAP00000033849 S1 1032 1100
ENSCJAP00000033849 S1 1146 1222
ENSCJAP00000033849 S1 1226 1298

Links

Other S1 family RBPs
Other Callithrix jacchus RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_2853000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2853000001 N 0.000
fgenesh1_pg.C_scaffold_305000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_305000001 N 0.000
fgenesh1_pg.C_scaffold_373000003 Phytophthora ramorum fgenesh1_pg.C_scaffold_373000003 N 0.000
fgenesh1_pg.C_scaffold_999000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_999000001 N 0.000
s_438716 Phytophthora sojae s_438716 N 0.000
s_439369 Phytophthora sojae s_439369 N 0.000
s_440041 Phytophthora sojae s_440041 N 0.000
s_445517 Phytophthora sojae s_445517 N 0.000
s_445549 Phytophthora sojae s_445549 N 0.000
s_445656 Phytophthora sojae s_445656 N 0.000
s_446612 Phytophthora sojae s_446612 N 0.000
s_446687 Phytophthora sojae s_446687 N 0.000
s_452594 Phytophthora sojae s_452594 N 0.000
s_452714 Phytophthora sojae s_452714 N 0.000
s_452989 Phytophthora sojae s_452989 N 0.000
s_455072 Phytophthora sojae s_455072 N 0.000
s_455516 Phytophthora sojae s_455516 N 0.000
s_455576 Phytophthora sojae s_455576 N 0.000
s_455924 Phytophthora sojae s_455924 N 0.000
s_456636 Phytophthora sojae s_456636 N 0.000
s_457020 Phytophthora sojae s_457020 N 0.000
s_459016 Phytophthora sojae s_459016 N 0.000
s_461682 Phytophthora sojae s_461682 N 0.000
s_462797 Phytophthora sojae s_462797 N 0.000
s_463332 Phytophthora sojae s_463332 N 0.000
s_464205 Phytophthora sojae s_464205 N 0.000
s_466998 Phytophthora sojae s_466998 N 0.000
s_469013 Phytophthora sojae s_469013 N 0.000
s_469380 Phytophthora sojae s_469380 N 0.000
s_469409 Phytophthora sojae s_469409 N 0.000
s_471430 Phytophthora sojae s_471430 N 0.000
s_471643 Phytophthora sojae s_471643 N 0.000
s_473180 Phytophthora sojae s_473180 N 0.000
s_477555 Phytophthora sojae s_477555 N 0.000
s_477701 Phytophthora sojae s_477701 N 0.000
s_517718 Phytophthora sojae s_517718 N 0.000