cassava1916.valid.m1 (Manihot esculenta)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 cassava1916.valid.m1 T62317_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava1916.valid.m1 YTH 448 538

Links

Other YTH family RBPs
Other Manihot esculenta RBPs

193 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL002461 Aedes aegypti AAEL002461 N 0.000
AGAP000977 Anopheles gambiae AGAP000977 N 0.000
Ame_R006638 Ailuropoda melanoleuca Ame_R006638 N 0.000
Aqu1.200557 Amphimedon queenslandica Aqu1.200557 N 0.000
Aqu1.228439 Amphimedon queenslandica Aqu1.228439 N 0.000
RBMX2 Anolis carolinensis ENSACAG00000008819 N 0.000
LOC534630 Bos taurus ENSBTAG00000006252 N 0.000
RBMX2 Canis familiaris ENSCAFG00000018770 N 0.000
LOC100388331 Callithrix jacchus ENSCJAG00000002436 N 0.000
RBMX2 Cavia porcellus ENSCPOG00000006640 N 0.000
rbmx2 Danio rerio ENSDARG00000044380 N 0.000
LOC100058600 Equus caballus ENSECAG00000008257 N 0.000
RBMX2 Erinaceus europaeus ENSEEUG00000000839 N 0.000
RBMX2 Echinops telfairi ENSETEG00000001763 N 0.000
RBMX2 Homo sapiens ENSG00000134597 N 0.000
RBMX2 Gasterosteus aculeatus ENSGACG00000001855 N 0.000
RBMX2 Gallus gallus ENSGALG00000004025 N 0.000
ENSGGOG00000016146 Gorilla gorilla ENSGGOG00000016146 N 0.000
RBMX2 Gorilla gorilla ENSGGOG00000023687 N 0.000
RBMX2 Loxodonta africana ENSLAFG00000017625 N 0.000
ENSLAFG00000028277 Loxodonta africana ENSLAFG00000028277 N 0.000
RBMX2 Macropus eugenii ENSMEUG00000010913 N 0.000
RBMX2 Meleagris gallopavo ENSMGAG00000001801 N 0.000
RBMX2 Microcebus murinus ENSMICG00000015139 N 0.000
ENSMLUG00000010298 Myotis lucifugus ENSMLUG00000010298 N 0.000
ENSMLUG00000017095 Myotis lucifugus ENSMLUG00000017095 N 0.000
RBMX2 Macaca mulatta ENSMMUG00000008389 N 0.000
XP_001110036.1 Macaca mulatta ENSMMUG00000020845 N 0.000
XM_001377711.1 Monodelphis domestica ENSMODG00000012002 N 0.000
ENSMODG00000019800 Monodelphis domestica ENSMODG00000019800 N 0.000
Rbmx2 Mus musculus ENSMUSG00000031107 N 0.000
RBMX2 Ornithorhynchus anatinus ENSOANG00000001362 N 0.000
RBMX2 Oryctolagus cuniculus ENSOCUG00000011809 N 0.000
ENSOCUG00000020937 Oryctolagus cuniculus ENSOCUG00000020937 N 0.000
ENSOGAG00000006237 Otolemur garnettii ENSOGAG00000006237 N 0.000
ENSOGAG00000009060 Otolemur garnettii ENSOGAG00000009060 N 0.000
RBMX2 Oryzias latipes ENSORLG00000013183 N 0.000
RBMX2 Procavia capensis ENSPCAG00000012903 N 0.000
ENSPPYG00000020717 Pongo pygmaeus ENSPPYG00000020717 N 0.000
XR_023755.1 Pan troglodytes ENSPTRG00000022269 N 0.000
RBMX2 Pteropus vampyrus ENSPVAG00000004425 N 0.000
Rbmx2 Rattus norvegicus ENSRNOG00000007371 N 0.000
RBMX2 Sorex araneus ENSSARG00000007350 N 0.000
RBMX2 Spermophilus tridecemlineatus ENSSTOG00000015391 N 0.000
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.000
RBMX2 Takifugu rubripes ENSTRUG00000001699 N 0.000
RBMX2 Tursiops truncatus ENSTTRG00000016210 N 0.000
estExt_fgenesh2_pg.C_1800064 Branchiostoma floridae estExt_fgenesh2_pg.C_1800064 N 0.000
e_gw1.98.15.1 Volvox carteri e_gw1.98.15.1 N 0.000
CG10466 Drosophila melanogaster FBgn0032822 N 0.000
GA10331-RA Drosophila pseudoobscura FBgn0070389 N 0.000
GF14433 Drosophila ananassae FBgn0091460 N 0.000
GG21207 Drosophila erecta FBgn0113387 N 0.000
GH13830 Drosophila grimshawi FBgn0121306 N 0.000
GI11259 Drosophila mojavensis FBgn0134020 N 0.000
GI11260 Drosophila mojavensis FBgn0134021 N 0.000
GI20215 Drosophila mojavensis FBgn0142951 N 0.000
GL26176 Drosophila persimilis FBgn0163758 N 0.000
GM17378 Drosophila sechellia FBgn0172288 N 0.000
GD24233 Drosophila simulans FBgn0195582 N 0.000
GJ13600 Drosophila virilis FBgn0200822 N 0.000
GK14925 Drosophila willistoni FBgn0216930 N 0.000
GE13281 Drosophila yakuba FBgn0230967 N 0.000
gw1.1.2244.1 Trichoplax adhaerens gw1.1.2244.1 N 0.000
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.000
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.000
PHUM617480 Pediculus humanus PHUM617480 N 0.000
SPPG_01752 Spizellomyces punctatus SPPG_01752 N 0.000
XP_001180915.1 Strongylocentrotus purpuratus XP_001180915.1 N 0.000
XP_002164481.1 Hydra magnipapillata XP_002164481.1 N 0.000
XP_791635.2 Strongylocentrotus purpuratus XP_791635.2 N 0.000