CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZRSR2
(
Gasterosteus aculeatus
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
ENSGACG00000015069
T00515_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000019877
CCCH ZF
177
203
RDVANCPFFLKTGACRFGDRCSRKHVY
ENSGACP00000019877
RRM
250
308
YHDVLPELKSVGKVVQFKVSCNYEPHLRGNVYIQFDTEEQCKEAIIKFNGRWYAGRQLH
ENSGACP00000019877
CCCH ZF
317
342
WKNAICGLFDRQKCPKGKHCNFLHVF
Links
Other
CCCH ZF,RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSACAG00000017034
Anolis carolinensis
ENSACAG00000017034
N
0.795
Zrsr2
Mus musculus
ENSMUSG00000031370
N
0.759
Zrsr1
Mus musculus
ENSMUSG00000044068
N
0.750
ENSOANG00000002571
Ornithorhynchus anatinus
ENSOANG00000002571
N
0.786
ENSOCUG00000004295
Oryctolagus cuniculus
ENSOCUG00000004295
N
0.768
ZRSR2
Oryzias latipes
ENSORLG00000003476
N
0.848
ENSPPYG00000020150
Pongo pygmaeus
ENSPPYG00000020150
N
0.759
ZRSR1
Pan troglodytes
ENSPTRG00000017138
N
0.759
ZRSR2
Pan troglodytes
ENSPTRG00000021693
N
0.759
ENSPVAG00000010216
Pteropus vampyrus
ENSPVAG00000010216
N
0.759
Zrsr1
Rattus norvegicus
ENSRNOG00000009639
N
0.750
Zrsr2
Rattus norvegicus
ENSRNOG00000033176
N
0.759
ENSTBEG00000008533
Tupaia belangeri
ENSTBEG00000008533
N
0.705
ZRSR2
Taeniopygia guttata
ENSTGUG00000007964
N
0.777
ZRSR2
Tetraodon nigroviridis
ENSTNIG00000009495
N
0.902
Q9W6Q9_FUGRU
Takifugu rubripes
ENSTRUG00000017089
N
0.920
ENSTSYG00000005278
Tarsius syrichta
ENSTSYG00000005278
N
0.759
ENSVPAG00000007641
Vicugna pacos
ENSVPAG00000007641
N
0.759
XM_001380899.1
Monodelphis domestica
ENSMODG00000017202
N
0.777
ZRSR2
Macaca mulatta
ENSMMUG00000014054
N
0.759
ENSBTAG00000020419
Bos taurus
ENSBTAG00000020419
N
0.759
XM_548872.2
Canis familiaris
ENSCAFG00000012201
N
0.750
ENSCJAG00000020956
Callithrix jacchus
ENSCJAG00000020956
N
0.750
ENSCPOG00000004227
Cavia porcellus
ENSCPOG00000004227
N
0.759
zrsr2
Danio rerio
ENSDARG00000058448
N
0.812
LOC100056195
Equus caballus
ENSECAG00000006454
N
0.759
ENSEEUG00000002115
Erinaceus europaeus
ENSEEUG00000002115
N
0.768
ENSETEG00000005141
Echinops telfairi
ENSETEG00000005141
N
0.723
ZRSR2
Homo sapiens
ENSG00000169249
N
0.759
ZRSR1
Homo sapiens
ENSG00000212643
N
0.759
ZRSR2
Gallus gallus
ENSGALG00000016552
N
0.786
ENSGGOG00000011962
Gorilla gorilla
ENSGGOG00000011962
N
0.759
ENSLAFG00000009326
Loxodonta africana
ENSLAFG00000009326
N
0.732
ENSLAFG00000018654
Loxodonta africana
ENSLAFG00000018654
N
0.723
ENSMGAG00000014689
Meleagris gallopavo
ENSMGAG00000014689
N
0.786
ENSMICG00000003211
Microcebus murinus
ENSMICG00000003211
N
0.759
ENSMLUG00000009780
Myotis lucifugus
ENSMLUG00000009780
N
0.750
Ame_R018576
Ailuropoda melanoleuca
Ame_R018576
N
0.759