PTSG_01604 (Salpingoeca rosetta)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PTSG_01604 T01535_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTSG_01604T0 CCCH ZF 178 204
PTSG_01604T0 CCCH ZF 216 242

Links

Other CCCH ZF family RBPs
Other Salpingoeca rosetta RBPs

119 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZFP36 Homo sapiens ENSG00000128016 D 0.000
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.778
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.778
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.722
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.759
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.741
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.722
ENSPPYG00000010577 Pongo pygmaeus ENSPPYG00000010577 I 0.000
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.759
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.759
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.759
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.759
ZFP36 Tursiops truncatus ENSTTRG00000003564 I 0.000
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.778
ZFP36 Tupaia belangeri ENSTBEG00000005948 I 0.000
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.759
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.778
ZFP36 Pan troglodytes ENSPTRG00000010968 I 0.000
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.778
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.759
ZFP36 Pteropus vampyrus ENSPVAG00000011124 I 0.000
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.759
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.778
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.000
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.759
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.759
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.778
ZFP36L2 Sus scrofa ENSSSCG00000008461 I 0.778
ZFP36 Sus scrofa ENSSSCG00000010708 I 0.000
zfp36 Xenopus tropicalis ENSXETG00000002899 I 0.000
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.000
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.759
AAD24207 Xenopus laevis AAD24207 I 0.000
AAD24208 Xenopus laevis AAD24208 I 0.759
AAD24209 Xenopus laevis AAD24209 I 0.778
AAH44086 Xenopus laevis AAH44086 I 0.778
AAH82435 Xenopus laevis AAH82435 I 0.000
AAH84197 Xenopus laevis AAH84197 I 0.759
AAH84221 Xenopus laevis AAH84221 I 0.778
AAI00163 Xenopus laevis AAI00163 I 0.759
AAI08849 Xenopus laevis AAI08849 I 0.000
BAC54909 Xenopus laevis BAC54909 I 0.778
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.778
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.759
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.759
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.759
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.778
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.759
Aqu1.221345 Amphimedon queenslandica Aqu1.221345 I 0.741
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.741
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.759
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.759
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.000
0300010273 Ostreococcus tauri 0300010273 I 0.000
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.778
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.759
Ame_R016002 Ailuropoda melanoleuca Ame_R016002 I 0.000
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.704
Q805B4 Xenopus laevis Q805B4 I 0.778
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.759
ZFP36L2 Homo sapiens ENSG00000152518 I 0.778
ZFP36 Cavia porcellus ENSCPOG00000011363 I 0.000
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.778
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.759
zfp36l1a Danio rerio ENSDARG00000016154 I 0.759
zfp36l1b Danio rerio ENSDARG00000021443 I 0.741
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.722
zgc:114130 Danio rerio ENSDARG00000040725 I 0.000
ZFP36 Danio rerio ENSDARG00000044395 I 0.704
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.759
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.759
Zfp36 Dipodomys ordii ENSDORG00000013487 I 0.000
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.759
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.778
LOC100397247 Callithrix jacchus ENSCJAG00000014156 I 0.000
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.759
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.722
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.000
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.759
ENSACAG00000009252 Anolis carolinensis ENSACAG00000009252 I 0.000
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.778
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.778
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.759
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.778
ZFP36 Canis familiaris ENSCAFG00000005530 I 0.000
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.759
LOC100063597 Equus caballus ENSECAG00000018860 I 0.759
ZFP36L1 Homo sapiens ENSG00000185650 I 0.759
ZFP36L2 Procavia capensis ENSPCAG00000010765 I 0.759
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.778
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.778
ZFP36 Monodelphis domestica ENSMODG00000013494 I 0.000
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.759
Zfp36 Mus musculus ENSMUSG00000044786 I 0.000
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.778
Zfp36l3 Mus musculus ENSMUSG00000059334 I 0.704
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.759
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.759
ZFP36 Oryctolagus cuniculus ENSOCUG00000003400 I 0.000
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.722
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.759
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.759
ZFP36 Myotis lucifugus ENSMLUG00000002942 I 0.000
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.778
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.704
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.722
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.759
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.722
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.778
ZFP36 Gorilla gorilla ENSGGOG00000014399 I 0.000
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.778
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.759
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.759
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.778
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.000
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.000
AGAP010954 Anopheles gambiae AGAP010954 N 0.722
EIN_295900 Entamoeba invadens EIN_295900 N 0.000
gw1.42.93.1 Daphnia pulex gw1.42.93.1 N 0.741
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.000