Unk (Dipodomys ordii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDORG00000008133 T02505_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000007630 CCCH ZF 90 112
ENSDORP00000007630 CCCH ZF 294 320

Links

Other CCCH ZF family RBPs
Other Dipodomys ordii RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH46725 Xenopus laevis AAH46725 N 0.940
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.843
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.980
UNK Pteropus vampyrus ENSPVAG00000008460 N 1.000
UNK Pan troglodytes ENSPTRG00000009656 N 1.000
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 1.000
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.788
UNK Procavia capensis ENSPCAG00000004504 N 0.980
UNKL Oryzias latipes ENSORLG00000005070 N 0.824
UNK Ochotona princeps ENSOPRG00000012784 N 0.920
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 1.000
Unk Mus musculus ENSMUSG00000020770 N 0.960
Unkl Mus musculus ENSMUSG00000015127 N 0.860
UNK Sus scrofa ENSSSCG00000017201 N 1.000
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 1.000
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.960
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.980
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.840
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.780
188708 Helobdella robusta 188708 N 0.700
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.780
PHUM219250 Pediculus humanus PHUM219250 N 0.820
ISCW001613 Ixodes scapularis ISCW001613 N 0.700
unk Xenopus tropicalis ENSXETG00000012578 N 0.920
UNK Tursiops truncatus ENSTTRG00000015890 N 0.980
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.824
UNK Takifugu rubripes ENSTRUG00000007192 N 0.900
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.804
UNKL Monodelphis domestica ENSMODG00000016188 N 0.843
UNK Monodelphis domestica ENSMODG00000007684 N 0.980
UNK Macaca mulatta ENSMMUG00000013646 N 1.000
LOC100067623 Equus caballus ENSECAG00000010641 N 0.788
UNKL Danio rerio ENSDARG00000037838 N 0.824
unk Danio rerio ENSDARG00000000935 N 0.840
UNK Cavia porcellus ENSCPOG00000012679 N 1.000
UNKL Cavia porcellus ENSCPOG00000011846 N 0.863
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 1.000
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.788
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 1.000
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 1.000
UNKL Bos taurus ENSBTAG00000014126 N 0.788
UNK Anolis carolinensis ENSACAG00000007303 N 0.960
AGAP000684 Anopheles gambiae AGAP000684 N 0.784
UNK Equus caballus ENSECAG00000024672 N 1.000
UNK Felis catus ENSFCAG00000005757 N 0.961
UNKL Homo sapiens ENSG00000059145 N 0.808
UNK Myotis lucifugus ENSMLUG00000015453 N 0.980
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.804
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.960
UNK Macropus eugenii ENSMEUG00000004094 N 0.980
UNK Loxodonta africana ENSLAFG00000022662 N 1.000
UNKL Loxodonta africana ENSLAFG00000018262 N 0.843
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.808
UNK Gorilla gorilla ENSGGOG00000009203 N 1.000
UNKL Gallus gallus ENSGALG00000006450 N 0.804
UNK Gallus gallus ENSGALG00000002278 N 0.960
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.885
UNK Homo sapiens ENSG00000132478 N 1.000
AAEL012456 Aedes aegypti AAEL012456 N 0.820