UNK (Takifugu rubripes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTRUG00000007192 T03525_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000017688 CCCH ZF 105 127
ENSTRUP00000017688 CCCH ZF 306 332
ENSTRUP00000017689 CCCH ZF 94 116
ENSTRUP00000017689 CCCH ZF 295 321
ENSTRUP00000017690 CCCH ZF 114 136
ENSTRUP00000017690 CCCH ZF 315 341
ENSTRUP00000017691 CCCH ZF 88 110
ENSTRUP00000017691 CCCH ZF 289 315

Links

Other CCCH ZF family RBPs
Other Takifugu rubripes RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH46725 Xenopus laevis AAH46725 N 0.920
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.843
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.920
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.900
UNK Pan troglodytes ENSPTRG00000009656 N 0.900
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.900
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.808
UNK Procavia capensis ENSPCAG00000004504 N 0.900
UNKL Oryzias latipes ENSORLG00000005070 N 0.824
UNK Ochotona princeps ENSOPRG00000012784 N 0.820
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.900
Unk Mus musculus ENSMUSG00000020770 N 0.920
Unkl Mus musculus ENSMUSG00000015127 N 0.840
UNKL Monodelphis domestica ENSMODG00000016188 N 0.843
UNK Sus scrofa ENSSSCG00000017201 N 0.900
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.900
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.920
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.800
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.760
188708 Helobdella robusta 188708 N 0.700
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.800
PHUM219250 Pediculus humanus PHUM219250 N 0.800
ISCW001613 Ixodes scapularis ISCW001613 N 0.700
unk Xenopus tropicalis ENSXETG00000012578 N 0.900
UNK Tursiops truncatus ENSTTRG00000015890 N 0.880
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.804
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.784
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.900
UNK Monodelphis domestica ENSMODG00000007684 N 0.900
UNK Macaca mulatta ENSMMUG00000013646 N 0.900
LOC100067623 Equus caballus ENSECAG00000010641 N 0.788
Unk Dipodomys ordii ENSDORG00000008133 N 0.900
UNKL Danio rerio ENSDARG00000037838 N 0.824
unk Danio rerio ENSDARG00000000935 N 0.880
UNK Cavia porcellus ENSCPOG00000012679 N 0.900
UNKL Cavia porcellus ENSCPOG00000011846 N 0.824
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.900
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.769
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.900
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.900
UNKL Bos taurus ENSBTAG00000014126 N 0.769
UNK Anolis carolinensis ENSACAG00000007303 N 0.900
AGAP000684 Anopheles gambiae AGAP000684 N 0.784
UNK Equus caballus ENSECAG00000024672 N 0.900
UNK Felis catus ENSFCAG00000005757 N 0.882
UNK Myotis lucifugus ENSMLUG00000015453 N 0.900
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.824
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.900
UNK Macropus eugenii ENSMEUG00000004094 N 0.900
UNK Loxodonta africana ENSLAFG00000022662 N 0.900
UNKL Loxodonta africana ENSLAFG00000018262 N 0.824
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.788
UNK Gorilla gorilla ENSGGOG00000009203 N 0.900
UNKL Gallus gallus ENSGALG00000006450 N 0.824
UNK Gallus gallus ENSGALG00000002278 N 0.900
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.942
UNK Homo sapiens ENSG00000132478 N 0.900
UNKL Homo sapiens ENSG00000059145 N 0.788
AAEL012456 Aedes aegypti AAEL012456 N 0.820