GH17894 (Drosophila grimshawi)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 FBgn0125362 T03726_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0151800 CCCH ZF 110 136
FBpp0151800 CCCH ZF 148 174

Links

Other CCCH ZF family RBPs
Other Drosophila grimshawi RBPs

124 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.833
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.852
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.704
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.815
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.870
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.815
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.852
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.833
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.833
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.833
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.852
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.852
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.833
ZFP36L2 Sus scrofa ENSSSCG00000008461 I 0.852
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.833
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.852
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.852
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.833
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.833
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.852
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.796
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.833
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.833
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.852
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.852
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.833
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.796
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.833
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.833
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.833
AAD24208 Xenopus laevis AAD24208 I 0.833
AAD24209 Xenopus laevis AAD24209 I 0.852
AAH44086 Xenopus laevis AAH44086 I 0.852
AAH84197 Xenopus laevis AAH84197 I 0.833
AAH84221 Xenopus laevis AAH84221 I 0.852
AAI00163 Xenopus laevis AAI00163 I 0.833
BAC54909 Xenopus laevis BAC54909 I 0.852
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.833
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.000
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.833
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.852
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.815
estExt_fgeneshDP_kg.C_230001 Dictyostelium purpureum estExt_fgeneshDP_kg.C_230001 I 0.000
Q805B4 Xenopus laevis Q805B4 I 0.852
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.000
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.833
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.000
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.000
0300010273 Ostreococcus tauri 0300010273 I 0.000
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.852
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.852
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.833
LOC100063597 Equus caballus ENSECAG00000018860 I 0.833
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.852
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.833
ENSCSAVG00000002923 Ciona savignyi ENSCSAVG00000002923 I 0.796
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.833
zfp36l1a Danio rerio ENSDARG00000016154 I 0.833
zfp36l1b Danio rerio ENSDARG00000021443 I 0.833
zfp36l2 Danio rerio ENSDARG00000021806 I 0.870
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.796
ZFP36 Danio rerio ENSDARG00000044395 I 0.000
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.833
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.852
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.852
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.000
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.833
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.852
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.852
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.833
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.852
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.833
Q4H2G7_CIOIN Ciona intestinalis ENSCING00000014446 I 0.796
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.833
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.722
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.852
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.852
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.833
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.833
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.852
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.852
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.852
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.833
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.852
Zfp36l3 Mus musculus ENSMUSG00000059334 I 0.833
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.833
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.833
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.815
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.852
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.796
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.704
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.833
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.833
ZFP36L2 Homo sapiens ENSG00000152518 I 0.852
ZFP36L1 Homo sapiens ENSG00000185650 I 0.833
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.722
gw1.14.301.1 Coccomyxa C 169 gw1.14.301.1 N 0.000
ECU01_0830 Encephalitozoon cuniculi ECU01_0830 N 0.000
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.000
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.000
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.000
CMA121C Cyanidioschyzon merolae CMA121C N 0.000
SPPG_04528 Spizellomyces punctatus SPPG_04528 N 0.000
RO3G_10992 Rhizopus oryzae RO3G_10992 N 0.000
RO3G_05094 Rhizopus oryzae RO3G_05094 N 0.000
PTTG_07763 Puccinia triticina PTTG_07763 N 0.000
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.000
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.722
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.000
e_gw1.1.2331.1 Agaricus bisporus e_gw1.1.2331.1 N 0.000
EDI_287240 Entamoeba dispar EDI_287240 N 0.000
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.000
estExt_fgenesh1_pg.C_3580026 Physcomitrella patens estExt_fgenesh1_pg.C_3580026 N 0.000
fgenesh1_pg.C_scaffold_4000193 Sporobolomyces roseus fgenesh1_pg.C_scaffold_4000193 N 0.000
EHI_008770 Entamoeba histolytica EHI_008770 N 0.000
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.704
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.704
fgeneshPB_pg.44__45 Phycomyces blakesleeanus fgeneshPB_pg.44__45 N 0.000
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.000
gw1.30.59.1 Lottia gigantea gw1.30.59.1 N 0.778
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.000
gw1.57.55.1 Melampsora laricis populina gw1.57.55.1 N 0.000
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.000
EIN_295900 Entamoeba invadens EIN_295900 N 0.000
Ein01_0730 Encephalitozoon intestinalis Ein01_0730 N 0.000
fgenesh1_pg.scaffold_257000036 Physcomitrella patens fgenesh1_pg.scaffold_257000036 N 0.000
fgenesh2_pg.scaffold_13000206 Monosiga brevicollis fgenesh2_pg.scaffold_13000206 N 0.704