estExt_fgenesh1_pm.C_50279 (Schizophyllum commune)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		estExt_fgenesh1_pm.C_50279 T07042_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_50279 KH 205 276
estExt_fgenesh1_pm.C_50279 CCHC ZF 314 331
estExt_fgenesh1_pm.C_50279 CCHC ZF 339 356

Links

Other CCHC ZF,KH family RBPs
Other Schizophyllum commune RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.700
NCU04110 Neurospora crassa NCU04110 N 0.708
e_gww2.7.165.1 Phanerochaete chrysosporium e_gww2.7.165.1 N 0.890
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.708
estExt_fgenesh3_pm.C_200020 Postia placenta estExt_fgenesh3_pm.C_200020 N 0.899
estExt_fgenesh3_pm.C_870007 Postia placenta estExt_fgenesh3_pm.C_870007 N 0.899
estExt_Genewise1Plus.C_11035 Sporobolomyces roseus estExt_Genewise1Plus.C_11035 N 0.833
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.700
gww1.11.161.1 Laccaria bicolor gww1.11.161.1 N 0.907
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.700
estExt_fgenesh1_pm.C_80273 Pleurotus ostreatus estExt_fgenesh1_pm.C_80273 N 0.908
estExt_fgenesh2_pm.C_30298 Agaricus bisporus estExt_fgenesh2_pm.C_30298 N 0.899
estExt_fgenesh2_pm.C_70506 Serpula lacrymans estExt_fgenesh2_pm.C_70506 N 0.927
estExt_Genewise1.C_110391 Heterobasidion annosum estExt_Genewise1.C_110391 N 0.899
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.708
estExt_Genewise1.C_130162 Tremella mesenterica estExt_Genewise1.C_130162 N 0.725
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.708
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.708
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 0.700
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.700
An02g06570 Aspergillus niger CADANGAG00002175 N 0.700
CC1G_06433 Coprinopsis cinerea CC1G_06433 N 0.917
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.700
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.700
CNBG_0731 Cryptococcus neoformans CNBG_0731 N 0.750
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.700
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.734
GLRG_01222 Colletotrichum graminicola GLRG_01222 N 0.700
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.734
PGTG_00318 Puccinia graminis PGTG_00318 N 0.769
PTTG_08570 Puccinia triticina PTTG_08570 N 0.759
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.706
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.706
VDAG_04652 Verticillium dahliae VDAG_04652 N 0.708
VDBG_09415 Verticillium albo atrum VDBG_09415 N 0.708
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 0.700
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.700
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.700
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.700