An02g06570 (Aspergillus niger)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		CADANGAG00002175 T06976_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00002113 KH 185 268
CADANGAP00002113 CCHC ZF 306 323
CADANGAP00002113 CCHC ZF 331 348

Links

Other CCHC ZF,KH family RBPs
Other Aspergillus niger RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 1.000
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 1.000
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.992
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.992
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.992
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.983
GLRG_01222 Colletotrichum graminicola GLRG_01222 N 0.983
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.983
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.975
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.975
VDAG_04652 Verticillium dahliae VDAG_04652 N 0.975
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.975
NCU04110 Neurospora crassa NCU04110 N 0.975
VDBG_09415 Verticillium albo atrum VDBG_09415 N 0.975
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.967
MGG_06748 Magnaporthe oryzae MGG_06748 N 0.967
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.967
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.967
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.967
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.967
PMAA_023720 Penicillium marneffei PMAA_023720 N 0.967
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.958
MCYG_00821 Microsporum canis MCYG_00821 N 0.950
FGSG_02080 Fusarium graminearum FGSG_02080 N 0.950
MGYG_01149 Microsporum gypseum MGYG_01149 N 0.942
SS1G_07196 Sclerotinia sclerotiorum SS1G_07196 N 0.942
AB04099.1 Alternaria brassicicola AB04099.1 N 0.942
BC1G_07392 Botrytis cinerea BC1G_07392 N 0.942
TERG_00369 Trichophyton rubrum TERG_00369 N 0.942
PTRG_00022 Pyrenophora tritici repentis PTRG_00022 N 0.933
estExt_Genewise1Plus.C_chr_50382 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50382 N 0.917
SNOG_11729 Stagonospora nodorum SNOG_11729 N 0.875
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.842
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.833
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.808
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.808
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.800
PredSwiss_EST660.1 Pneumocystis carinii PredSwiss_EST660.1 N 0.783
SOCG_03845 Schizosaccharomyces octosporus SOCG_03845 N 0.750
SPOG_03392 Schizosaccharomyces cryophilus SPOG_03392 N 0.750
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.742
estExt_Genewise1.C_12313 Neurospora discreta estExt_Genewise1.C_12313 N 0.742
e_gw1.6.74.1 Phycomyces blakesleeanus e_gw1.6.74.1 N 0.717
estExt_fgenesh1_pm.C_50279 Schizophyllum commune estExt_fgenesh1_pm.C_50279 N 0.700