GLRG_01222 (Colletotrichum graminicola)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		GLRG_01222 T06941_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_01222T0 KH 179 262
GLRG_01222T0 CCHC ZF 300 317
GLRG_01222T0 CCHC ZF 325 342

Links

Other CCHC ZF,KH family RBPs
Other Colletotrichum graminicola RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
An02g06570 Aspergillus niger CADANGAG00002175 N 0.983
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 0.983
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.983
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 0.983
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.975
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.975
VDBG_09415 Verticillium albo atrum VDBG_09415 N 0.975
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.975
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.975
VDAG_04652 Verticillium dahliae VDAG_04652 N 0.975
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.975
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.975
NCU04110 Neurospora crassa NCU04110 N 0.975
MGG_06748 Magnaporthe oryzae MGG_06748 N 0.967
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.967
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.967
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.967
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.967
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.967
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.967
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.958
PMAA_023720 Penicillium marneffei PMAA_023720 N 0.950
MCYG_00821 Microsporum canis MCYG_00821 N 0.950
FGSG_02080 Fusarium graminearum FGSG_02080 N 0.950
TERG_00369 Trichophyton rubrum TERG_00369 N 0.942
SS1G_07196 Sclerotinia sclerotiorum SS1G_07196 N 0.942
MGYG_01149 Microsporum gypseum MGYG_01149 N 0.942
BC1G_07392 Botrytis cinerea BC1G_07392 N 0.942
AB04099.1 Alternaria brassicicola AB04099.1 N 0.942
PTRG_00022 Pyrenophora tritici repentis PTRG_00022 N 0.933
estExt_Genewise1Plus.C_chr_50382 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50382 N 0.917
SNOG_11729 Stagonospora nodorum SNOG_11729 N 0.875
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.842
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.833
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.808
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.808
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.800
PredSwiss_EST660.1 Pneumocystis carinii PredSwiss_EST660.1 N 0.783
SOCG_03845 Schizosaccharomyces octosporus SOCG_03845 N 0.750
SPOG_03392 Schizosaccharomyces cryophilus SPOG_03392 N 0.750
estExt_Genewise1.C_12313 Neurospora discreta estExt_Genewise1.C_12313 N 0.750
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.742
e_gw1.6.74.1 Phycomyces blakesleeanus e_gw1.6.74.1 N 0.717
estExt_fgenesh1_pm.C_50279 Schizophyllum commune estExt_fgenesh1_pm.C_50279 N 0.700