CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANIA_10615
(
Aspergillus nidulans
)
CCHC ZF,KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1)
IPR001878
IPR018111
CADANIAG00005496
T06977_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00005496
KH
178
261
EKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEGKGRSDAAHASNQEEDLHCLIMADTEEKVNKAKKLV
CADANIAP00005496
CCHC ZF
299
316
QACQNCGQIGHRKYDCPE
CADANIAP00005496
CCHC ZF
324
341
IICRVCGNAGHMARDCPD
Links
Other
CCHC ZF,KH
family RBPs
Other
Aspergillus nidulans
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFLA_031810
Aspergillus flavus
CADAFLAG00002556
N
1.000
Pc18g00800
Penicillium chrysogenum
Pc18g00800
N
0.992
NFIA_066410
Neosartorya fischeri
CADNFIAG00006460
N
0.992
ACLA_038770
Aspergillus clavatus
CADACLAG00003525
N
0.992
estExt_Genewise1.C_12889
Cryphonectria parasitica
estExt_Genewise1.C_12889
N
0.992
An02g06570
Aspergillus niger
CADANGAG00002175
N
0.992
AFUA_3G10840
Aspergillus fumigatus
CADAFUAG00005564
N
0.992
estExt_fgenesh1_pm.C_10341
Neurospora tetrasperma
estExt_fgenesh1_pm.C_10341
N
0.983
Pa_2_3850
Podospora anserina
Pa_2_3850
N
0.983
NCU04110
Neurospora crassa
NCU04110
N
0.983
GSTUMT00005703001
Tuber melanosporum
GSTUMT00005703001
N
0.975
VDAG_04652
Verticillium dahliae
VDAG_04652
N
0.975
VDBG_09415
Verticillium albo atrum
VDBG_09415
N
0.975
BDBG_03134
Blastomyces dermatitidis
BDBG_03134
N
0.975
GLRG_01222
Colletotrichum graminicola
GLRG_01222
N
0.975
CHGG_07335
Chaetomium globosum
CHGG_07335
N
0.967
CIMG_03768
Coccidioides immitis
CIMG_03768
N
0.967
CPSG_03514
Coccidioides posadasii
CPSG_03514
N
0.967
estExt_Genewise1Plus.C_22270
Thielavia terrestris
estExt_Genewise1Plus.C_22270
N
0.967
PMAA_023720
Penicillium marneffei
PMAA_023720
N
0.967
MCYG_00821
Microsporum canis
MCYG_00821
N
0.958
MGG_06748
Magnaporthe oryzae
MGG_06748
N
0.958
FGSG_02080
Fusarium graminearum
FGSG_02080
N
0.950
BC1G_07392
Botrytis cinerea
BC1G_07392
N
0.950
MGYG_01149
Microsporum gypseum
MGYG_01149
N
0.950
TERG_00369
Trichophyton rubrum
TERG_00369
N
0.950
SS1G_07196
Sclerotinia sclerotiorum
SS1G_07196
N
0.950
EAT80773.2
Phaeosphaeria nodorum
EAT80773.2
N
0.950
AB04099.1
Alternaria brassicicola
AB04099.1
N
0.950
PTRG_00022
Pyrenophora tritici repentis
PTRG_00022
N
0.942
estExt_Genewise1Plus.C_chr_50382
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_50382
N
0.925
SNOG_11729
Stagonospora nodorum
SNOG_11729
N
0.867
PABG_02328
Paracoccidioides brasiliensis
PABG_02328
N
0.842
FVEG_07538
Fusarium verticillioides
FVEG_07538
N
0.842
TEQG_01541
Trichophyton equinum
TEQG_01541
N
0.817
TESG_02440
Trichophyton tonsurans
TESG_02440
N
0.817
SJAG_00249
Schizosaccharomyces japonicus
SJAG_00249
N
0.800
PredSwiss_EST660.1
Pneumocystis carinii
PredSwiss_EST660.1
N
0.783
estExt_Genewise1.C_12313
Neurospora discreta
estExt_Genewise1.C_12313
N
0.750
SOCG_03845
Schizosaccharomyces octosporus
SOCG_03845
N
0.742
SPOG_03392
Schizosaccharomyces cryophilus
SPOG_03392
N
0.742
bpb1
Schizosaccharomyces pombe
SPCC962.06c
N
0.742
e_gw1.6.74.1
Phycomyces blakesleeanus
e_gw1.6.74.1
N
0.708
estExt_fgenesh1_pm.C_50279
Schizophyllum commune
estExt_fgenesh1_pm.C_50279
N
0.700