XM_001364763.1 (Monodelphis domestica)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSMODG00000008047 T07282_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM4
M109_0.6 		Homo sapiens GCGCGSG RNAcompete
Ray et al.(2013)
RNCMPT00113 		0.965
RBM4
M050_0.6 		Homo sapiens GCGCGSS RNAcompete
Ray et al.(2013)
RNCMPT00052 		0.965
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000010014 RRM 4 66
ENSMODP00000010014 RRM 80 142
ENSMODP00000010014 CCHC ZF 160 177

Links

Other CCHC ZF,RRM family RBPs
Other Monodelphis domestica RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG05375 Caenorhabditis briggsae CBG05375 N 0.000
CRE11770 Caenorhabditis remanei CRE11770 N 0.000
CJA05884 Caenorhabditis japonica CJA05884 N 0.000
CBN12329 Caenorhabditis brenneri CBN12329 N 0.000
CBN01162 Caenorhabditis brenneri CBN01162 N 0.000
CBG02387 Caenorhabditis briggsae CBG02387 N 0.000
CRE30229 Caenorhabditis remanei CRE30229 N 0.000
CRE30220 Caenorhabditis remanei CRE30220 N 0.000
CRE30217 Caenorhabditis remanei CRE30217 N 0.000
CRE30216 Caenorhabditis remanei CRE30216 N 0.000
CRE30215 Caenorhabditis remanei CRE30215 N 0.000
CBN09841 Caenorhabditis brenneri CBN09841 N 0.000
CBG05418 Caenorhabditis briggsae CBG05418 N 0.000
CBG05376 Caenorhabditis briggsae CBG05376 N 0.000
EEED8 Caenorhabditis elegans EEED8 N 0.000