e_gw1.93.90.1 (Lottia gigantea)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		e_gw1.93.90.1 T07532_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.742
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.93.90.1 RRM 17 87
e_gw1.93.90.1 CCHC ZF 110 127

Links

Other CCHC ZF,RRM family RBPs
Other Lottia gigantea RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTTG_07469 Puccinia triticina PTTG_07469 N 0.000
PTTG_09789 Puccinia triticina PTTG_09789 N 0.000
AT1G36800 Arabidopsis thaliana AT1G36800-TAIR-G N 0.000
Skud_Contig1846.2 Saccharomyces kudriavzevii Skud_Contig1846.2 N 0.000
fgenesh2_kg.6_#_1126_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.6_#_1126_#_11486_1_CFPN N 0.000