CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BC1G_15234
(
Botrytis cinerea
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
BC1G_15234
T07855_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BC1T_15234
CCHC ZF
183
199
ICYRCGEKGHWIQVCPT
Links
Other
CCHC ZF
family RBPs
Other
Botrytis cinerea
RBPs
62 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AT1G14170
Arabidopsis thaliana
AT1G14170-TAIR-G
N
0.000
XM_002892746.1
Arabidopsis lyrata
fgenesh2_kg.1__1532__AT1G14170.3
N
0.000