LOC_Os10g17820 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os10g17820 T12253_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os10g17820.1 CCHC ZF 617 634

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

659 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK01923.1 Cannabis sativa PK01923.1 N 0.000
MDP0000289531 Malus x domestica MDP0000289531 N 0.000
LjT23J20.20.nc Lotus japonicus LjT23J20.20.nc N 0.000
mgf019401m Mimulus guttatus mgf019401m N 0.000
mgf006636m Mimulus guttatus mgf006636m N 0.000
mgf002385m Mimulus guttatus mgf002385m N 0.000
Glyma13g09970.1 Glycine max Glyma13g09970.1 N 0.000
Cucsa.107130 Cucumis sativus Cucsa.107130 N 0.000
cassava28560.m1 Manihot esculenta cassava28560.m1 N 0.000
B9GY53_POPTR Populus trichocarpa POPTR_0003s14940 N 0.000
GSVIVG00012163001 Vitis vinifera GSVIVG00012163001 N 0.000
ppa001609m Prunus persica ppa001609m N 0.000