estExt_Genewise1Plus.C_240008 (Agaricus bisporus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 estExt_Genewise1Plus.C_240008 T15390_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_240008 CCHC ZF 78 95

Links

Other CCHC ZF family RBPs
Other Agaricus bisporus RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_028520 Penicillium marneffei PMAA_028520 N 0.000
PredSwiss_ASS2010_1894.1 Pneumocystis carinii PredSwiss_ASS2010_1894.1 N 0.000
s_441997 Phytophthora sojae s_441997 N 0.000
gw1.4.1338.1 Schizophyllum commune gw1.4.1338.1 N 0.000
fgeneshPB_pg.4__237 Phycomyces blakesleeanus fgeneshPB_pg.4__237 N 0.000
fgenesh1_pm.C_scaffold_1000464 Neurospora tetrasperma fgenesh1_pm.C_scaffold_1000464 N 0.000
fgenesh1_pg.C_scaffold_47000011 Phytophthora ramorum fgenesh1_pg.C_scaffold_47000011 N 0.000
fgenesh1_pg.C_chr_1.1000545 Pichia stipitis fgenesh1_pg.C_chr_1.1000545 N 0.000
eu2.Lbscf0002g03430 Laccaria bicolor eu2.Lbscf0002g03430 N 0.000
estExt_Genewise1Plus.C_22631 Thielavia terrestris estExt_Genewise1Plus.C_22631 N 0.000
estExt_Genewise1.C_11798 Neurospora discreta estExt_Genewise1.C_11798 N 0.000
estExt_fgeneshMC_pg.C_60156 Mucor circinelloides estExt_fgeneshMC_pg.C_60156 N 0.000
estExt_fgenesh1_pm.C_30270 Myceliophthora thermophila estExt_fgenesh1_pm.C_30270 N 0.000
estExt_fgenesh1_pm.C_120018 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120018 N 0.000
PredSwiss_CON1061.1 Pneumocystis carinii PredSwiss_CON1061.1 N 0.000
PredSwiss_CON2858.1 Pneumocystis carinii PredSwiss_CON2858.1 N 0.000
Scas_Contig641.28 Saccharomyces castellii Scas_Contig641.28 N 0.000
Pc21g11350 Penicillium chrysogenum Pc21g11350 N 0.000
Kwal_8261 Kluyveromyces waltii Kwal_8261 N 0.000
KLTH0D08316g Kluyveromyces thermotolerans KLTH0D08316g N 0.000
KLLA0C12837g Kluyveromyces lactis KLLA0C12837g N 0.000
GSTUMT00011325001 Tuber melanosporum GSTUMT00011325001 N 0.000
Genemark.8861_g Serpula lacrymans Genemark.8861_g N 0.000
fgeneshTM_pm.1_#_792 Tremella mesenterica fgeneshTM_pm.1_#_792 N 0.000
estExt_Genewise1.C_60832 Pleurotus ostreatus estExt_Genewise1.C_60832 N 0.000
estExt_fgenesh2_pm.C_60269 Heterobasidion annosum estExt_fgenesh2_pm.C_60269 N 0.000
estExt_fgenesh2_kg.C_60291 Agaricus bisporus estExt_fgenesh2_kg.C_60291 N 0.000
estExt_fgenesh1_pg.C_70305 Cryphonectria parasitica estExt_fgenesh1_pg.C_70305 N 0.000
EDP43343.1 Malassezia globosa EDP43343.1 N 0.000
ABR070C Ashbya gossypii ABR070C N 0.000
estExt_fgenesh1_pg.C_130086 Sporobolomyces roseus estExt_fgenesh1_pg.C_130086 N 0.000
e_gwh2.3.362.1 Phanerochaete chrysosporium e_gwh2.3.362.1 N 0.000
MGYG_01930 Microsporum gypseum MGYG_01930 N 0.000
MGG_09536 Magnaporthe oryzae MGG_09536 N 0.000
MCYG_01387 Microsporum canis MCYG_01387 N 0.000
LELG_04332 Lodderomyces elongisporus LELG_04332 N 0.000
GLRG_03342 Colletotrichum graminicola GLRG_03342 N 0.000
DEHA0G03058g Debaryomyces hansenii DEHA0G03058g N 0.000
CPSG_03009 Coccidioides posadasii CPSG_03009 N 0.000
CNBG_0786 Cryptococcus neoformans CNBG_0786 N 0.000
CIMG_04249 Coccidioides immitis CIMG_04249 N 0.000
CHGG_07192 Chaetomium globosum CHGG_07192 N 0.000
CC1G_00892 Coprinopsis cinerea CC1G_00892 N 0.000
BC1G_15234 Botrytis cinerea BC1G_15234 N 0.000
AMAG_12234 Allomyces macrogynus AMAG_12234 N 0.000
PITG_10087 Phytophthora infestans PITG_10087 N 0.000
RO3G_12479 Rhizopus oryzae RO3G_12479 N 0.000
SJAG_02668 Schizosaccharomyces japonicus SJAG_02668 N 0.000
e_gw1.311.2.1 Postia placenta e_gw1.311.2.1 N 0.000
e_gw1.135.14.1 Postia placenta e_gw1.135.14.1 N 0.000
SPBP8B7.15c Schizosaccharomyces pombe SPBP8B7.15c N 0.000
NCU06718 Neurospora crassa NCU06718 N 0.000
VDBG_00415 Verticillium albo atrum VDBG_00415 N 0.000
VDAG_00026 Verticillium dahliae VDAG_00026 N 0.000
UREG_05672 Uncinocarpus reesii UREG_05672 N 0.000
UM00321 Ustilago maydis UM00321 N 0.000
TESG_06028 Trichophyton tonsurans TESG_06028 N 0.000
TERG_04664 Trichophyton rubrum TERG_04664 N 0.000
TEQG_07175 Trichophyton equinum TEQG_07175 N 0.000
SS1G_05474 Sclerotinia sclerotiorum SS1G_05474 N 0.000
SPPG_06553 Spizellomyces punctatus SPPG_06553 N 0.000
AMAG_05802 Allomyces macrogynus AMAG_05802 N 0.000