LOC_Os01g66300 (Oryza sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LOC_Os01g66300 T20132_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g66300.1 KH 141 200

Links

Other KH family RBPs
Other Oryza sativa RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.817
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.750
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.750
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.750
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.833
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.717
e_gw1.35.311.1 Selaginella moellendorfii e_gw1.35.311.1 N 0.700
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.783
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.770
mgf006761m Mimulus guttatus mgf006761m N 0.721
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.937
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.850
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.721
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.831
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.800
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.800
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.726
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 1.000
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.892
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.902
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.817
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.770
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.726
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.852
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.892
SB03G042090 Sorghum bicolor Sb03g042090 N 0.967
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.800
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.708