LOC_Os03g25970 (Oryza sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LOC_Os03g25970 T20138_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g25970.1 KH 41 99
LOC_Os03g25970.1 KH 139 206
LOC_Os03g25970.1 KH 281 334
LOC_Os03g25970.1 KH 366 433
LOC_Os03g25970.2 KH 41 99
LOC_Os03g25970.2 KH 139 206
LOC_Os03g25970.2 KH 281 334
LOC_Os03g25970.2 KH 366 433

Links

Other KH family RBPs
Other Oryza sativa RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE011311 Oryza indica BGIOSIBCE011311 N 0.904
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.702
GRMZM2G126120 Zea mays GRMZM2G126120 N 0.884
GRMZM2G084540 Zea mays GRMZM2G084540 N 0.873
mgf011898m Mimulus guttatus mgf011898m N 0.702
mgf007265m Mimulus guttatus mgf007265m N 0.702
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.702
Sb01g034070 Sorghum bicolor Sb01g034070 N 0.892
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.725
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.718
BRADI1G61240 Brachypodium distachyon BRADI1G61240 N 0.912
BRADI1G61230 Brachypodium distachyon BRADI1G61230 N 0.920
PDK_20s1316613g001 Phoenix dactylifera PDK_20s1316613g001 N 0.729