GSVIVG00011439001 (Vitis vinifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GSVIVG00011439001 T20087_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00011439001 KH 44 101
GSVIVT00011439001 KH 140 207
GSVIVT00011439001 KH 283 339
GSVIVT00011439001 KH 370 437

Links

Other KH family RBPs
Other Vitis vinifera RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.865
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.865
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.865
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.865
ppa003758m Prunus persica ppa003758m N 0.853
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.841
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.835
MDP0000573228 Malus x domestica MDP0000573228 N 0.835
mgf007265m Mimulus guttatus mgf007265m N 0.833
mgf011898m Mimulus guttatus mgf011898m N 0.833
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.825
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.820
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.819
PK16782.1 Cannabis sativa PK16782.1 N 0.817
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.813
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.813
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.810
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.806
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.805
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.800
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.794
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.763
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.763
29813.m001513 Ricinus communis 29813.m001513 N 0.759
B9HI86_POPTR Populus trichocarpa POPTR_0008s08810 N 0.748
B9HXY8_POPTR Populus trichocarpa POPTR_0010s17430 N 0.748
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.735
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.731
BRADI1G61230 Brachypodium distachyon BRADI1G61230 N 0.728
GRMZM2G084540 Zea mays GRMZM2G084540 N 0.726
LOC_Os03g25970 Oryza sativa LOC_Os03g25970 N 0.718
Sb01g034070 Sorghum bicolor Sb01g034070 N 0.718
GRMZM2G126120 Zea mays GRMZM2G126120 N 0.718
BRADI1G61240 Brachypodium distachyon BRADI1G61240 N 0.713