mgf007265m (Mimulus guttatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 mgf007265m T21290_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf007265m KH 42 99
mgf007265m KH 139 207
mgf007265m KH 279 333
mgf007265m KH 365 432

Links

Other KH family RBPs
Other Mimulus guttatus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf011898m Mimulus guttatus mgf011898m N 1.000
ppa003758m Prunus persica ppa003758m N 0.849
MDP0000573228 Malus x domestica MDP0000573228 N 0.835
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.833
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.821
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.821
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.821
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.821
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.805
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.802
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.800
PK16782.1 Cannabis sativa PK16782.1 N 0.796
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.794
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.788
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.787
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.781
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.778
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.778
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.776
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.771
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.760
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.715
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.715
GRMZM2G084540 Zea mays GRMZM2G084540 N 0.714
BRADI1G61230 Brachypodium distachyon BRADI1G61230 N 0.713
B9HXY8_POPTR Populus trichocarpa POPTR_0010s17430 N 0.709
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.708
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.708
29813.m001513 Ricinus communis 29813.m001513 N 0.708
GRMZM2G126120 Zea mays GRMZM2G126120 N 0.706
LOC_Os03g25970 Oryza sativa LOC_Os03g25970 N 0.702
Sb01g034070 Sorghum bicolor Sb01g034070 N 0.702