CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCING00000008328
(
Ciona intestinalis
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSCING00000008328
T22702_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000017002
La
27
84
VKHQLEYYFSRENLTQDPYLVSQMDSQQFVSILTIANFNAVKKLTLDINLVIEALKAS
Links
Other
La
family RBPs
Other
Ciona intestinalis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os01g35670
Oryza sativa
LOC_Os01g35670
N
0.000
LOC_Os06g18049
Oryza sativa
LOC_Os06g18049
N
0.000
LOC_Os06g18058
Oryza sativa
LOC_Os06g18058
N
0.000
LOC_Os06g37120
Oryza sativa
LOC_Os06g37120
N
0.000
LOC_Os07g17650
Oryza sativa
LOC_Os07g17650
N
0.000
LOC_Os07g45700
Oryza sativa
LOC_Os07g45700
N
0.000
LOC_Os07g47890
Oryza sativa
LOC_Os07g47890
N
0.000
LOC_Os08g11080
Oryza sativa
LOC_Os08g11080
N
0.000
LOC_Os08g20330
Oryza sativa
LOC_Os08g20330
N
0.000
LOC_Os08g27910
Oryza sativa
LOC_Os08g27910
N
0.000
LOC_Os09g01830
Oryza sativa
LOC_Os09g01830
N
0.000
LOC_Os09g01840
Oryza sativa
LOC_Os09g01840
N
0.000
LOC_Os09g14220
Oryza sativa
LOC_Os09g14220
N
0.000
LOC_Os10g01008
Oryza sativa
LOC_Os10g01008
N
0.000
LOC_Os10g12800
Oryza sativa
LOC_Os10g12800
N
0.000
LOC_Os10g20050
Oryza sativa
LOC_Os10g20050
N
0.000
LOC_Os10g31580
Oryza sativa
LOC_Os10g31580
N
0.000
LOC_Os12g15850
Oryza sativa
LOC_Os12g15850
N
0.000
LOC_Os06g17780
Oryza sativa
LOC_Os06g17780
N
0.000
LOC_Os06g17680
Oryza sativa
LOC_Os06g17680
N
0.000
LOC_Os06g17640
Oryza sativa
LOC_Os06g17640
N
0.000
LOC_Os02g12990
Oryza sativa
LOC_Os02g12990
N
0.000
LOC_Os02g16370
Oryza sativa
LOC_Os02g16370
N
0.000
LOC_Os02g16970
Oryza sativa
LOC_Os02g16970
N
0.000
LOC_Os03g23070
Oryza sativa
LOC_Os03g23070
N
0.000
LOC_Os03g29120
Oryza sativa
LOC_Os03g29120
N
0.000
LOC_Os03g33172
Oryza sativa
LOC_Os03g33172
N
0.000
LOC_Os03g33182
Oryza sativa
LOC_Os03g33182
N
0.000
LOC_Os03g35670
Oryza sativa
LOC_Os03g35670
N
0.000
LOC_Os04g05890
Oryza sativa
LOC_Os04g05890
N
0.000
LOC_Os04g07070
Oryza sativa
LOC_Os04g07070
N
0.000
LOC_Os04g07360
Oryza sativa
LOC_Os04g07360
N
0.000
LOC_Os04g28920
Oryza sativa
LOC_Os04g28920
N
0.000
LOC_Os04g29160
Oryza sativa
LOC_Os04g29160
N
0.000
LOC_Os04g55340
Oryza sativa
LOC_Os04g55340
N
0.000
LOC_Os05g09100
Oryza sativa
LOC_Os05g09100
N
0.000
LOC_Os05g23170
Oryza sativa
LOC_Os05g23170
N
0.000
LOC_Os06g17190
Oryza sativa
LOC_Os06g17190
N
0.000
LOC_Os12g33660
Oryza sativa
LOC_Os12g33660
N
0.000