CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP1
(
Ornithorhynchus anatinus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSOANG00000005096
T22804_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000008090
La
283
340
IKRQIEYYFSVDNLERDFFLRRKMDTDGFLPITLIASFHRVQALTTDVGLIVKALKDS
Links
Other
La
family RBPs
Other
Ornithorhynchus anatinus
RBPs
98 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP1
Oryctolagus cuniculus
ENSOCUG00000013066
N
0.914
LARP1B
Pteropus vampyrus
ENSPVAG00000005373
N
0.810
Larp1
Rattus norvegicus
ENSRNOG00000031544
N
0.914
Larp1b
Rattus norvegicus
ENSRNOG00000038366
N
0.810
LARP1
Sorex araneus
ENSSARG00000013907
N
0.810
LARP1B
Sus scrofa
ENSSSCG00000009073
N
0.810
LARP1
Sus scrofa
ENSSSCG00000017069
N
0.914
LARP1
Spermophilus tridecemlineatus
ENSSTOG00000005678
N
0.914
LARP1
Tupaia belangeri
ENSTBEG00000003381
N
0.828
LARP1B
Tupaia belangeri
ENSTBEG00000004177
N
0.741
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.931
LARP1
Pteropus vampyrus
ENSPVAG00000002262
N
0.914
LARP1
Pan troglodytes
ENSPTRG00000017447
N
0.914
LARP1B
Oryctolagus cuniculus
ENSOCUG00000013330
N
0.810
LARP1B
Otolemur garnettii
ENSOGAG00000005771
N
0.810
LARP1
Otolemur garnettii
ENSOGAG00000016750
N
0.914
LARP1B
Ochotona princeps
ENSOPRG00000005478
N
0.810
LARP1
Ochotona princeps
ENSOPRG00000013014
N
0.914
LARP1
Oryzias latipes
ENSORLG00000000824
N
0.845
LARP1B
Oryzias latipes
ENSORLG00000017954
N
0.810
LARP1
Procavia capensis
ENSPCAG00000006407
N
0.897
LARP1B
Procavia capensis
ENSPCAG00000007546
N
0.776
LOC742664
Pan troglodytes
ENSPTRG00000016437
N
0.793
LARP2
Taeniopygia guttata
ENSTGUG00000002098
N
0.759
LARP1B
Tetraodon nigroviridis
ENSTNIG00000012398
N
0.828
LARP1B
Takifugu rubripes
ENSTRUG00000005612
N
0.810
GL23866
Drosophila persimilis
FBgn0161456
N
0.700
GJ24490
Drosophila virilis
FBgn0211570
N
0.733
GK22522
Drosophila willistoni
FBgn0224499
N
0.733
GE10516
Drosophila yakuba
FBgn0228374
N
0.717
GA27083-RA
Drosophila pseudoobscura
FBgn0248454
N
0.700
FBgn0261618
Drosophila melanogaster
FBgn0261618
N
0.717
Ame_R005086
Ailuropoda melanoleuca
Ame_R005086
N
0.914
Ame_R010453
Ailuropoda melanoleuca
Ame_R010453
N
0.810
AAH93491
Xenopus laevis
AAH93491
N
0.845
AAH98998
Xenopus laevis
AAH98998
N
0.759
GI24848
Drosophila mojavensis
FBgn0147568
N
0.717
GH13999
Drosophila grimshawi
FBgn0121475
N
0.733
LARP1
Takifugu rubripes
ENSTRUG00000009470
N
0.879
LARP1B
Tarsius syrichta
ENSTSYG00000002037
N
0.776
LARP1
Tarsius syrichta
ENSTSYG00000013732
N
0.914
LARP1B
Tursiops truncatus
ENSTTRG00000012984
N
0.810
LARP1
Tursiops truncatus
ENSTTRG00000015934
N
0.914
LARP1B
Vicugna pacos
ENSVPAG00000007223
N
0.810
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.879
larp1b
Xenopus tropicalis
ENSXETG00000022512
N
0.741
GF16129
Drosophila ananassae
FBgn0093151
N
0.717
GG12072
Drosophila erecta
FBgn0104364
N
0.717
AAI34816
Xenopus laevis
AAI34816
N
0.776
amel4_ncbi_hmm3629
Apis mellifera
amel4_ncbi_hmm3629
N
0.717
LARP1B
Callithrix jacchus
ENSCJAG00000003338
N
0.776
LOC100393482
Callithrix jacchus
ENSCJAG00000004454
N
0.914
LARP1
Cavia porcellus
ENSCPOG00000003377
N
0.914
ENSCSAVG00000008913
Ciona savignyi
ENSCSAVG00000008913
N
0.700
larp1
Danio rerio
ENSDARG00000018434
N
0.862
LARP1
Dasypus novemcinctus
ENSDNOG00000012073
N
0.914
LARP1B
Dasypus novemcinctus
ENSDNOG00000018765
N
0.810
Larp1
Dipodomys ordii
ENSDORG00000002897
N
0.914
ENSDORG00000013445
Dipodomys ordii
ENSDORG00000013445
N
0.724
LOC100071865
Equus caballus
ENSECAG00000001088
N
0.810
ENSCING00000003088
Ciona intestinalis
ENSCING00000003088
N
0.717
LARP1
Choloepus hoffmanni
ENSCHOG00000012716
N
0.741
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.776
AAEL009073
Aedes aegypti
AAEL009073
N
0.700
AGAP005291
Anopheles gambiae
AGAP005291
N
0.700
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.948
LARP1B
Anolis carolinensis
ENSACAG00000011338
N
0.862
LARP1
Bos taurus
ENSBTAG00000008443
N
0.897
LARP1B
Bos taurus
ENSBTAG00000012135
N
0.810
LARP1B
Canis familiaris
ENSCAFG00000003831
N
0.810
LARP1
Canis familiaris
ENSCAFG00000017639
N
0.914
LARP1B
Choloepus hoffmanni
ENSCHOG00000005354
N
0.810
LARP1
Equus caballus
ENSECAG00000017002
N
0.914
LARP1
Erinaceus europaeus
ENSEEUG00000001065
N
0.793
LARP1B
Echinops telfairi
ENSETEG00000012497
N
0.724
LARP1B
Meleagris gallopavo
ENSMGAG00000004809
N
0.741
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.931
LARP1
Microcebus murinus
ENSMICG00000000837
N
0.914
LARP1
Myotis lucifugus
ENSMLUG00000002608
N
0.914
LARP1B
Myotis lucifugus
ENSMLUG00000010229
N
0.810
LARP1
Macaca mulatta
ENSMMUG00000009411
N
0.914
LARP1B
Macaca mulatta
ENSMMUG00000021347
N
0.793
LARP1
Monodelphis domestica
ENSMODG00000008663
N
0.914
LARP1B
Monodelphis domestica
ENSMODG00000012300
N
0.845
Larp1
Mus musculus
ENSMUSG00000037331
N
0.914
LARP1
Macropus eugenii
ENSMEUG00000002957
N
0.914
LARP1
Loxodonta africana
ENSLAFG00000008991
N
0.897
LARP1
Echinops telfairi
ENSETEG00000020251
N
0.897
LARP1
Felis catus
ENSFCAG00000000592
N
0.914
LARP1B
Homo sapiens
ENSG00000138709
N
0.793
LARP1
Homo sapiens
ENSG00000155506
N
0.914
LARP1B
Gasterosteus aculeatus
ENSGACG00000004609
N
0.810
LARP1
Gallus gallus
ENSGALG00000004001
N
0.931
LARP2
Gallus gallus
ENSGALG00000010207
N
0.810
ENSGGOG00000006048
Gorilla gorilla
ENSGGOG00000006048
N
0.914
ENSGGOG00000024102
Gorilla gorilla
ENSGGOG00000024102
N
0.914
ENSLAFG00000008473
Loxodonta africana
ENSLAFG00000008473
N
0.810
Larp1b
Mus musculus
ENSMUSG00000037814
N
0.810